Methanobrevibacter ruminantium: mru_0923
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Entry
mru_0923 CDS
T01166
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
mru_0923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mru03019
]
mru_0923
Messenger RNA biogenesis [BR:
mru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
mru_0923
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ADC46774
UniProt:
D3E2L3
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All DBs
Position
1176701..1178050
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AA seq
449 aa
AA seq
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MTVEVIAIGGYEEVGKNMTAVKVGEDVIIFDMGIHLDRISIHEDTDIDRMHSLDLIERGV
IPDDTLMKDVDGKVKGIVFSHGHLDHIGAVAKLAHRYDAPIIGTPYTTALIEKQIKGERK
FKVNNPIRPLNPGSKIKLSKDITLEFVQSTHSIPQAVFPVLHTSEGIIVYALDFKFDNHQ
KVSPPPDYNRLRELGRKGVLALIVETTNAINYTETRTYSEKVARIILEDLMKRAFKGQKE
GMIVTTFSSHIERIQTIADIAKDSNREILFLGRSMERFCGIAQNLGILKLPQNAYVYGSP
KAVNKALMKAEDDRDQYLLVTTGHQGEPDALLPRIASARTPFNVKKGDNVIFSAPIIPNP
TNAANRHILESKLKANGARIYANAHVSGHAGREDHRDFLRMLRPKHIIPAHGELEMLVAY
GELAEEEGYRIGNNVHILRNAQAQVFNGD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaagtaatagcaattggtggatacgaagaagtaggaaagaatatgactgcc
gtaaaggtaggggaagatgtaatcatatttgatatgggtatccacttagacagaataagt
atccacgaggatacagatatagacagaatgcacagtttggacttgatagagcgtggagtc
attccagatgacacattgatgaaggatgtagacggtaaggttaagggaatagtcttctcc
cacggtcacttggaccatattggagctgtagcaaagcttgctcacagatacgatgctcca
atcataggaactccatatacaacagccctcattgaaaagcaaatcaagggagagcgcaag
ttcaaggtaaacaatcctataagaccactcaatcctggaagcaagatcaaactgtcaaag
gacataaccttggagtttgttcagtccactcacagtattccacaagcggttttccctgta
ttgcacacttcagagggaataattgtctatgcattggactttaagtttgacaatcatcag
aaggtctctccaccacctgactataacaggcttagggaattaggaagaaaaggagtattg
gctcttattgtagagaccaccaatgcaatcaactatacagaaacaaggacatactctgaa
aaggttgcaagaataatccttgaagacttgatgaagagagcctttaaaggccaaaaggaa
ggaatgattgtaaccacattctcttcacatatcgaaaggattcaaacaattgcagacatt
gcaaaggacagcaatagggaaatattattccttggccgttccatggaaaggttctgcgga
atcgctcaaaaccttggaatattgaaattgccacagaatgcatatgtatatggctctcca
aaggctgtaaacaaggctcttatgaaagcagaggacgatagggatcaatacctccttgta
accacaggtcaccaaggggaaccggatgctctccttccaagaatagcaagcgcaagaact
ccattcaatgtaaagaaaggagataatgttatattttcagctcctatcattccaaatccg
accaatgcagctaacagacatattttggaaagcaaattaaaggcaaacggtgcaagaatc
tatgcaaacgctcacgtttcaggtcacgcaggaagggaagaccatagggacttcttaaga
atgctaaggcctaaacacatcattccagctcacggagagttagagatgcttgtggcttat
ggagagcttgcagaggaagaaggctataggatcggaaacaatgttcatatattaaggaat
gctcaagctcaggtttttaatggtgattag
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