Methanobrevibacter ruminantium: mru_1106
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Entry
mru_1106 CDS
T01166
Symbol
rad50
Name
(GenBank) DNA double-strand break repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mru
Methanobrevibacter ruminantium
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mru03400
]
mru_1106 (rad50)
DNA repair and recombination proteins [BR:
mru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
mru_1106 (rad50)
Archaeal homologous recombinant proteins
mru_1106 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
AAA_27
AAA_29
AAA_21
SbcC_Walker_B
Trans_reg_C
ABC_tran
HALZ
DUF6858
MukB
Motif
Other DBs
NCBI-ProteinID:
ADC46957
UniProt:
D3E346
LinkDB
All DBs
Position
1448168..1450966
Genome browser
AA seq
932 aa
AA seq
DB search
MIFKHLQLKNFKSHADTELDLDLGISLIVGENGAGKSSIFEAISFALFKNYTTNNITDLV
RTNKNLDEKIEMSVKLTFLCEGNEYMVERGGILSPSKTKSKPNFKSISNLFKISNGREDI
IASGNKEVDRQIEELLNMNSSTFLNAIYIRQGEISALIDDTPANRKKLITKLLRIEELET
AYNNIPSIIEEYKTRKAVLESNIRPESELNFELKKAKEDHFNLDDQIKKSKEEFEGLKVE
LENIKEEKEKLDKEKSDFESLKLKHAHEEENLSALNKGKEELFTKLNEITRNETEMGILK
PFCEKLPIYKEFKESFLALNKLKEDEENHKKTLSQIEEYKTVIKDEQENHEKYIALEGEI
KVLNNKKIEMSSEIKNLNELESRKDTLTQEVSLNNQKLETFFNSSKSVLSQFDLEEEISP
IKTNDDFNKLESIVEDLRTNLRTSIDNTSTEIDNLKKESISLKQEIKSLDEPLADIKKVE
NKCPVCQSEISEDKKNELINGYEATISGNTKRINEINGFLLKLNEDKSLNESKLKSLDSI
KNDIYANKHIVDDLDKSNKTLETLDAKIKELQGKKEELESLDKMIESKNGEFIELEAHNK
KYLEASTLLKSFPDETKVKDDLYAIYGKIKTEDEKLKTYISSDSELSLNITLEELDESIE
KLSEKDKRYNILLGSVKDKKEYEDKYENKKKEIESKTQEIEEIKKQIESSSYDEEYYNHV
NILLERLNNKFTYYSQDIAVKETNLANFETVIKNIEEIIQQNREYKEEYIAVTEYYNLLE
DFRKLYSKDGIQRDLKSQSRPLIQKNTKDFFDKFSFKYSDLILDDDYNISIFGPEGEANI
DMVSGGEKIAIALALRLGITQAMSKGNIETILLDEPTIHLDSFRRQELINVLRSMSIIPQ
MIIVTHDTELETAADTLISVEKEEGISKIENS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatatttaaacatcttcaattaaagaacttcaaatcacatgcagacactgaattggat
ttggatcttggcataagtctaatcgttggtgaaaacggtgcaggaaagtcatcaatattt
gaagccatatcctttgcattgtttaagaattacacaaccaacaacatcaccgatttggtt
agaactaacaagaatttggatgaaaagatagaaatgtcagttaagctaaccttcctttgt
gagggaaatgaatatatggtggaaaggggaggcatattatctccatcaaagaccaaatca
aagcctaatttcaagtcaatatcaaatctgtttaaaataagcaatggacgagaggatatc
attgcatctggaaacaaggaagtggacaggcaaatagaagagctcttaaacatgaactcc
tcaacatttctaaatgcaatctatatccgtcagggagagatatctgccttgatagatgac
actccagcaaaccgtaagaaattgattaccaagctcttgagaattgaggaattggaaact
gcatacaataacattccaagcattattgaagagtataaaacaagaaaggcagtattggaa
agcaatattcgtccggaatccgaacttaattttgagttgaagaaggctaaggaagaccat
tttaacttagatgaccagataaaaaaatcaaaagaggaatttgaaggcctcaaggtcgaa
cttgaaaatataaaagaggaaaaggaaaaattggacaaggaaaaatctgattttgaatct
cttaaattaaagcatgctcatgaagaggaaaatctgagtgctctaaacaaaggcaaggaa
gagctcttcactaaactaaatgagatcacaagaaatgaaacagagatgggcattcttaag
ccattctgcgagaaacttcctatttataaagaattcaaagagtcctttttagctttaaat
aagttaaaagaagatgaagagaatcataaaaagaccttaagtcagattgaagaatataag
actgtcattaaagatgagcaagaaaatcatgagaaatacattgctttagaaggtgaaata
aaggtcttaaacaataagaaaatagagatgtcctctgagattaaaaatctgaatgaattg
gaatctcgcaaagacaccctgactcaagaggtcagtctaaacaatcaaaaattagagaca
ttctttaacagttctaaatctgttctctcacaatttgatcttgaagaggaaatcagccct
ataaaaaccaatgatgacttcaataaattggaaagtattgtagaagaccttagaactaat
cttagaacttcaattgacaatacaagcactgaaatagataatttaaagaaggaatcaatc
agtctaaagcaggaaataaaatcattggatgagccattggctgatattaaaaaggttgaa
aacaaatgccctgtctgccaatctgaaattagtgaagataagaagaatgaacttatcaat
gggtatgaggccacaatatctggcaatacaaagaggataaatgaaattaatgggtttctc
cttaaattaaatgaggataaatccttgaatgagtctaaattaaagagccttgattcaatt
aaaaacgatatttatgctaataagcatattgtagatgaccttgacaagtccaataagact
cttgaaacattggatgctaaaatcaaagagcttcaagggaaaaaggaggagcttgaaagt
ttagataaaatgatagaatccaaaaatggagaattcattgaacttgaagcccataataag
aaatatctggaagcaagcactcttcttaagtctttccctgatgaaactaaagtcaaggat
gacttatatgcaatatatggcaagatcaagactgaggatgaaaagcttaaaacatatatc
agttcagattcagagctttctttaaatattaccttggaagagcttgatgagtcaattgaa
aaactatccgaaaaggataagagatataatatcttattaggttcagttaaagataagaaa
gagtatgaagataaatatgagaataaaaagaaagaaatcgaatcaaaaactcaagagatt
gaggagattaaaaagcagatagaatcttccagctatgatgaggaatattataatcatgta
aatatcttgcttgaaaggttaaacaataaattcacttattattctcaggacattgctgtt
aaggagactaatcttgccaattttgaaactgtaatcaagaatattgaagagatcattcaa
cagaacagagaatataaggaagagtatattgcagttaccgaatattataatctccttgag
gactttagaaaactatacagcaaggacggaattcaaagggatcttaaatcacaatccaga
ccgttgattcagaagaataccaaggatttctttgataagttcagcttcaagtattcagat
ttaatcttggatgatgactataacatttctatttttggccctgagggtgaggcgaatata
gatatggtcagtggtggtgaaaagattgctatagctcttgctttaagattgggaattact
caagccatgtctaagggtaatattgaaacaattcttttggatgagcctacaattcatttg
gatagcttccgcagacaggagctgatcaatgtattgaggagcatgtctataattcctcaa
atgattatagtcactcacgatacagagcttgagactgctgccgatactctgatttcagtt
gaaaaagaagagggaatttctaaaattgaaaatagttaa
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