Methanobrevibacter ruminantium: mru_1111
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Entry
mru_1111 CDS
T01166
Name
(GenBank) ATP-dependent DNA helicase UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru03420
Nucleotide excision repair
mru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
mru_1111
03430 Mismatch repair
mru_1111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mru03400
]
mru_1111
Enzymes [BR:
mru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
mru_1111
DNA repair and recombination proteins [BR:
mru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
mru_1111
MMR (mismatch excision repair)
Other MMR factors
mru_1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_11
DEAD
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ADC46962
UniProt:
D3E351
LinkDB
All DBs
Position
1457147..1459714
Genome browser
AA seq
855 aa
AA seq
DB search
MISYEEFEKLVVEILERDISSNSDQKAAISADKSQSLFIVAGPGSGKTTVMVLKILKFIF
VDDVQPKEILATTFTKKAASELLSRILSWGDKLKKKIPVFIMDKVMNGEMADGSVVDKVR
KIDFNQINVGTIDSIADELLRVHRDAGTSQPILIEDFVANSVMINECLLKNDMYLHESLQ
EYLAEITGKESQIDQKPKVKNLTAMADILLSIKEHIYYNMVDINDILADTKDNERGKKIA
LNLIMEYEKTLRSQNIFDFAMLETEFLNRLSSGKLDSFLDDVKVILVDEYQDTNLLQESI
YFRIAESAIKNGGNITVVGDDDQSLYRFRGASVDLFTNFIERVSRIGIEAKEINLKTNYR
STENIIDLCNDFVELDDEYQDARVKEKPKIVFPNLDSSEDTSENESPEDLPNEDEIETQK
IPVLGMFRSSEEKLAMDLTNFLDELNRKGKVKRKVKRVLNKDINKKLNSDSEDALESYKK
SGFELAQSEGEIIIELDEETGSIDDVAFLTYSPKEVTHNSRKFPFILKKRLEHLRTPIRV
FNPRGQDLQDIESVAVFCGLMLECIDPNSYYQNSNKKLPRLARRNMSVWRRKAQSFIKDV
NPEPHSPISLEDFIIHWQVRQPFNTNGSKDLKWPKEAGLMELAYKLVTWIEEFQDDDEGL
VYLKAITQTINQTSFFNKYSSNIVFTSHEAEEESINEALMNIFVPIAVGGVKIDENLFEV
IPPNRFNIMSIHQSKGLEFPLVIVDVGSRFKKNTVRESNLRFPKKADKSSIIQDRIRKYS
SLGESERDSKDRAFDDLTRLYFVAFSRAKDVLLLVGLNPNIDGYKQKDKLQKIPNVALGW
NRDEEFIGFDDIYLI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
gtgataagttacgaagaatttgaaaagctggttgtagagatattagaaagggatatctct
tccaattcagaccaaaaggccgctatatctgctgataagtcacaatccttatttattgta
gcaggtccaggctctggaaagactacagttatggttttaaagatacttaaatttattttt
gtagatgatgtccagccaaaggagatacttgcaactacatttactaaaaaggctgcttca
gaactattatcccgtatattaagctggggagataagcttaagaaaaaaatccctgttttt
attatggataaggtaatgaatggggaaatggcagatggctctgttgtagataaggttaga
aaaatcgatttcaatcaaatcaatgtaggaacaatagacagcatagcagatgagctctta
agggtccatagggatgcaggtacaagccagcctattctgattgaggattttgttgcaaat
tcagttatgattaatgaatgtcttttaaagaatgatatgtatttgcatgagtccttgcag
gagtatttggctgagataacaggaaaggaatctcaaattgaccaaaagcctaaggttaaa
aaccttacagccatggcagatatcctccttagcattaaggagcatatatattacaatatg
gttgacattaatgatatactggctgatacaaaggataatgaaaggggaaagaaaatagca
ttgaatcttattatggaatatgaaaaaacccttagaagtcagaatatctttgattttgcc
atgttagagactgaatttttaaacagattgagttcaggtaaattggatagctttttagat
gatgttaaagtgattttagttgacgaatatcaggacaccaatctccttcaggaaagcatt
tactttaggattgcagaatctgccattaaaaatggcggtaacattactgttgtaggagat
gacgaccaatctttatacagatttagaggagcaagcgttgacttgtttaccaatttcatt
gaaagagtttctagaattggcatagaagcgaaagagataaatcttaagacaaattacaga
tcaactgaaaacatcattgacttatgcaatgactttgttgaattggatgatgagtatcag
gatgctcgtgtaaaggaaaagcctaaaatcgtttttcctaatcttgattcttctgaagat
acttcagaaaatgaatctccagaagacctacctaatgaggatgaaatagaaacccaaaag
attcctgttttaggcatgttccgttcatctgaagaaaagcttgcaatggatttgactaac
tttttagatgaactaaacagaaaaggaaaagtaaagagaaaagtaaagagagtcttaaac
aaggacatcaataaaaaactaaattcagacagtgaagatgccttggaaagctataagaag
tctggctttgagcttgctcaaagcgaaggggaaatcataatagagcttgatgaggagaca
ggttccatagatgatgttgcatttttaacatattcccctaaggaagtcactcataactct
cgcaaattcccatttattcttaaaaaacgcttagaacaccttagaactccaattagagta
ttcaatccaaggggacaggatctgcaggatatcgaatctgttgcagtgttctgcgggttg
atgcttgaatgcatagatccaaactcctattaccagaattcaaataaaaagcttcctcgc
cttgcaagacgaaatatgtctgtatggagaagaaaagcccaatcattcatcaaggatgta
aatccagagcctcactctccaatttcccttgaggatttcataattcattggcaggtaagg
cagcctttcaatacaaacggttcaaaagacctgaaatggcctaaggaagcaggcctaatg
gaacttgcttataaattggttacttggattgaagagtttcaggatgatgacgaaggactg
gtatacctaaaggcgattacccaaacaatcaatcagacaagcttctttaataaatactct
tcaaacatagttttcacttcccatgaggctgaagaggaatcaatcaatgaggcattgatg
aacatattcgtacctattgccgttgggggagttaagattgatgaaaacctatttgaagtc
atacctccaaacaggtttaatataatgtccatacatcaatctaaaggcttggaatttcct
cttgtgattgtagatgttgggtccaggtttaagaagaatacggtaagggaatccaaccta
aggtttcctaaaaaggcagacaagtcatcaatcattcaggatagaatacgaaaatacagc
agcttaggtgaaagcgaaagggattcaaaggatagggcctttgatgatcttacccgacta
tactttgttgcattctcaagagccaaggatgttttgctattagttggtttaaatccaaat
attgatggatataaacaaaaagataaattgcaaaaaatacctaatgttgctttaggttgg
aatagggatgaagaattcatagggtttgatgacatttatttaatttaa
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