Methanobrevibacter ruminantium: mru_1319
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Entry
mru_1319 CDS
T01166
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mru
Methanobrevibacter ruminantium
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mru03019
]
mru_1319
Messenger RNA biogenesis [BR:
mru03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
mru_1319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ADC47169
UniProt:
D3E3Q8
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All DBs
Position
complement(1756700..1760212)
Genome browser
AA seq
1170 aa
AA seq
DB search
MIVLNKRKKSWEIYPIGSPKGALNTKRQAEFVGILRFMEGEDGLSIKRFLIKSDKEEKPL
APSKAINLLRSQAVFLAQKDDEMEAFLEKNNVKVRFTNICQHCSYEGYVTIINSDFSYNY
HDQLICKSCAEETIKRELQLRGYDKKVFRNFKKVLEKTGSLDDVLEMLSPRFDPLAHTDL
TLFDTIKVHEDKIPKIAMKRLKVPKEFRDVLLKDNQYLLPVQYLAIREGLLKDENLLVVS
ATGSGKTLVGELAGVPKALNGKKFLFLTPLVALANQKYRDFKKRYEPLGLKVAIKVGMNR
IKAKGELKLPDSNIADADIVVGTYEGIDFLLRSGKSDLLNDLGLVLIDEIHTISDEERGL
RLNGLIKRIEHLFPNTQVIGLSATIKNPKTLAQDFNMKLVQYKERPVPLERHIVFVNGDV
QRRLLMRKLVQREFYSTSSKGFSGQTLIFTNSRRKTHKIANFLSGKGINASAYHAGLSYF
KKEKIEKDFSKGKIAAVVTTAALAAGVDFPASQVIFESLLMGNKWISPNEFSQMLGRAGR
PSYHDRGIIYLVPEIGSEFDGESEESVALDLLESDVENIIVDYTEDGSLEQILADISSRS
LTKVRDVINFYKDIPVPIDINTALEELRDKKAIEIHADDTIDVTRFGKAVAMSFLSIDDG
VIIKDSINDKNYLSQYYSKPFFKTNLRELRRLSDRIDEENEEILNRNRKIQHKLDQLKKN
ESQKKEDKDKEDKTDKKNKKSKKNKSKKSKDSKKDKGKDNSKKSKKSEDSKKDKKNKNNS
NKSKKDKSENKNKSNKSNKSKKDKSENKNKSNKSNKSKKDKSENKNKSNKSNKKNSSNKE
FKDSKKDKKSKNSKDNKSESSKKDKKSNKSNKYNKYNKSNKYNKSKKSNKNNKNSSSKNK
NDNSKDSNKDKTNHKESKSESNQSKNLEKDSHPISKDYKNSNASVSDDLKDYSKKVMYNK
RINMSKKQHKTIEDKPILVNKLNFKENIFSEINPRMSKKEVNANNLLKVQSIALDLELFE
NAYLAPVVHKQIVSALKVNFSTRLFSESTLDIISSGEAIAKLDIKFQDALLKLQIDFLRC
DCNDRPFCECLQRGISYYILNQRLNKRDPIDISKSLLKEYQIQAYPGDIFSWLDAYVRNL
DAIKRVAQAYGKKDIVKEADKLIKIIETGK
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatagttttaaacaaaagaaagaaatcttgggaaatatatcctattggaagtcctaaa
ggagctcttaatacaaaaaggcaggctgagtttgtaggcattctccgctttatggaaggg
gaggacggattatcaatcaagcgttttctaattaaaagcgataaggaagaaaagcctctt
gctccttctaaggcgatcaatttattaagatctcaagctgttttcttggcacaaaaagat
gatgaaatggaggcattccttgaaaagaacaatgtcaaggtcagatttacaaacatctgt
cagcattgtagttatgaaggatatgtgaccattataaactcagatttttcatataactat
catgatcagctcatctgcaaatcctgtgccgaagagacaatcaagagagagcttcagctt
aggggatatgacaagaaggtatttagaaacttcaagaaggtccttgaaaagactggcagc
ttggatgatgttttagagatgctttcaccaagatttgaccctctcgcccatacagacttg
actttatttgacaccataaaggttcatgaggataagatacctaaaatcgcaatgaagcgt
cttaaggttccaaaggaatttagggatgttctcctcaaggataaccaatatctcctgccg
gttcaataccttgcaattagggaaggcctccttaaggatgagaatctcttggttgtttca
gctaccggaagcggaaagacattggttggagagcttgcaggggttccaaaggcattgaat
ggtaagaaattcctctttctgacccctcttgttgcacttgcaaatcaaaagtacagagac
ttcaagaagagatatgagccacttggccttaaggttgcaatcaaagtggggatgaacaga
atcaaagcaaagggagagcttaagcttccagattcaaatattgccgatgcggacattgtg
gttggaacatatgagggtattgattttctacttagatcaggcaaatcagacctcttgaat
gatttaggccttgttttaatagacgagattcatacaatctccgatgaggagagaggtctc
agactcaacggacttataaaaagaatcgagcatctctttccaaacacccaagtgattggc
ctctctgcaactataaaaaatccaaagactttggcacaggactttaacatgaaactggtc
cagtataaggagcgcccagttcctttagagagacatatcgtttttgttaatggagatgtt
caaagaagactgttaatgagaaaattagttcaaagggagttttactcaacatcctcaaag
ggattcagcggacagacattgatatttaccaattcaagaagaaaaacccataagatagct
aatttcctatctggtaagggaataaacgcctccgcttatcatgccggactatcctacttt
aaaaaggaaaagatagaaaaggacttttcaaagggaaagattgcagcggtggtcaccact
gcagctctagctgcaggagtggatttcccggcatcccaagtaatatttgagtccctttta
atgggaaacaaatggatttctccaaatgagttttcacagatgttaggaagagcaggaagg
cctagctatcatgacaggggaatcatatatcttgttccagagattggaagtgaattcgac
ggtgaaagtgaggagtccgtagccctagatcttttagaaagtgatgtggagaatatcatt
gttgattatacagaagacggatcacttgagcagatacttgcagacatctcatcaaggtct
ttaactaaagtgagggatgtaatcaatttctataaggatattccagttccaattgatata
aatactgcccttgaagaattaagggataaaaaagcgatagagatacatgcagatgatact
attgatgtaactcggtttggaaaagcggtggctatgtcattcttgtcaattgatgatggg
gtaatcattaaggattccattaatgataagaattatttaagccagtattacagcaagcca
ttctttaagaccaatcttagggagcttagaaggttgtccgataggattgatgaggagaat
gaggagattcttaatagaaataggaagatacaacataagttggatcagttaaagaagaac
gaatctcaaaagaaagaggataaggataaggaagataagactgataagaagaataagaag
tctaaaaagaataaatctaagaagtctaaggattctaagaaggataaaggtaaagataat
tctaagaagtccaagaaatctgaggattctaagaaagataagaaaaataaaaataattct
aataaatctaaaaaagataaatctgagaataagaataaatctaataaatctaataaatct
aaaaaagataaatctgagaataagaataaatctaataaatctaataaatctaaaaaagat
aaatctgaaaataagaataaatctaataaatctaataaaaagaacagttctaataaggaa
tttaaggattctaaaaaagataaaaagtctaagaattctaaagacaataaatctgagagt
tctaaaaaggataaaaaatccaataaatctaataaatataataaatataataaatctaat
aaatataataaatctaagaaatctaataaaaataataagaattcaagttcaaagaacaaa
aatgataattctaaagattctaataaagataaaactaatcataaagagtctaaatcagaa
tctaatcaatctaaaaacttagaaaaagacagccatcctatctctaaggactataagaat
tcaaatgcatctgtctctgatgatttaaaggactattctaaaaaagtaatgtataataaa
agaatcaacatgtctaaaaagcagcataaaaccatagaagataagcctattcttgtaaac
aagcttaactttaaggaaaatatatttagcgagatcaatccaagaatgtctaaaaaggaa
gtgaacgctaacaatcttcttaaggtccagtccatagcccttgacttggaattgtttgaa
aatgcatatcttgctcctgttgttcataagcagatagtatctgcacttaaagtaaacttt
tccacaagattgttttcagaatcaacccttgatataatatcctctggtgaagccattgcc
aaattggatattaagttccaggatgctcttttaaagcttcagatagatttcttaagatgt
gactgcaatgacaggccattctgtgaatgtcttcaaaggggaatttcctattatatattg
aatcaaagattgaataagagggatcctattgacatttccaaatcacttcttaaggaatat
cagattcaagcttatcctggagatattttctcatggctggatgcctatgtgagaaatttg
gatgctattaaaagagttgcacaggcatatggtaaaaaggacatagttaaagaagcggat
aaactaataaagataattgaaactggtaaataa
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