Methanobrevibacter ruminantium: mru_1816
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Entry
mru_1816 CDS
T01166
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase subunit B' RpoB1
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
mru_1816 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mru03021
]
mru_1816 (rpoB1)
Enzymes [BR:
mru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
mru_1816 (rpoB1)
Transcription machinery [BR:
mru03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
mru_1816 (rpoB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF5817
Auto_anti-p27
RNA_pol_Rpb2_45
Zf_2nd_IFT121
DUF8617
Zn_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
ADC47666
UniProt:
D3DZI8
LinkDB
All DBs
Position
complement(2346177..2347988)
Genome browser
AA seq
603 aa
AA seq
DB search
MVKAKIYINGKLTGTCDEPEEFVKEMRARRRSGEIHNEMNITYYDENHEIYIFTDPGRAR
RPLILVEKGEPLLKDEHIEAITKGELKWDNLFELGLLEYLDAEEEENSYIAMNLSQLNED
HTHLEIDPSTMLGICAGIIPFSDHNSSPRNTMEAGMTKQALGLYVSNYALRTDTRGHLLH
HPQTPLVKTRIIDAINYDDRPSGQNLVVALMSYEGYNMEDAMILNKSSLERGMGRSSFFR
SYEASERRYPGGQEDKFERPEKGVKGYRSEEAYKNLDEDGIVNPESHVESGDVLIGKTSP
PRFLGEIDEFGTVAEKRRETSVTVRHGEKGIVDAVLLTETVEGSKLTKIRVRDTRQPEFG
DKFASRHGQKGVVGLILSQDDIPFTEDGVVPDIIVNPHAIPSRMSVGQVLEMVAGKAGCM
EGHRMDGTPFNDNVEGEIKRALHDNGFESAGCESLYNGVTGERIEAEIFVGVAYYQKLHH
MTTDKVYARSTGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEAVVCNECGMLAVYDKNKNKMYCPICGDSETYPVEISYAFKLLLDELKSLCIFPKLILG
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggctaaaatttatattaacggtaaacttacaggaacttgtgatgaacctgaa
gagtttgttaaggaaatgcgcgctagaagaagatctggcgagattcacaatgaaatgaac
attacctattatgatgaaaaccatgagatttatattttcactgaccctggaagggcaaga
agacctttgattcttgttgaaaaaggtgagccattgcttaaagatgaacacattgaagca
attacaaagggagaattgaaatgggacaatctgtttgaattaggtcttttggaatatttg
gatgctgaagaggaagagaattcatatattgcaatgaacttaagccaattgaatgaagac
cacacccacttggagattgacccatctaccatgctcggtatatgtgctggaattattcca
ttttcagaccacaactcatctcctaggaacacaatggaagcagggatgacaaaacaggca
ttaggattatacgtatccaactacgcattgcgtaccgatacccgtggtcacttattgcac
caccctcaaactccactggtaaagacaagaatcattgatgcaatcaattatgatgacagg
ccatccggacagaacctggttgtagctcttatgtcttacgaaggatataacatggaagac
gcaatgattctcaacaaatcctctctcgaaaggggaatgggaagatccagcttcttcagg
tcctatgaggcatctgaaagaaggtatcctggtggacaagaggacaagtttgaaagacct
gaaaaaggagttaaaggttacagatccgaagaagcttataaaaaccttgacgaagacgga
atcgtaaaccctgaatcccatgttgaatcaggtgatgtattaatcggtaagacttcacct
ccaaggttccttggtgaaattgacgagttcggtaccgttgcagagaaaagaagagagact
tctgtcactgtaaggcatggtgaaaagggtattgtagatgcagttctccttaccgaaacc
gttgaagggagcaaattaactaaaataagagtaagagacacaagacaacctgaattcggt
gacaagttcgcatcaagacacggtcagaaaggggttgtaggtctcatattatctcaagat
gacattccatttacagaagacggagtcgttccggatatcattgtaaatcctcacgctatt
ccatcaaggatgtctgtaggacaggtattggaaatggttgcaggtaaggccggttgtatg
gaaggtcaccgtatggacggtactccattcaatgacaatgttgaaggagaaatcaagaga
gcccttcatgacaacggattcgaatctgcaggctgtgaatcattatacaatggtgtaacc
ggagaacgtatcgaagctgaaatcttcgtcggcgttgcatattaccaaaaattgcaccac
atgacaaccgataaggtttatgcccgttcaaccggacctgttcaagtgcttacacgtcag
cctactgaaggtagagctcgtgaaggtggtctcaggtttggtgagatggaaagagactgt
cttattgcacacggtgcagctcttgcacttaaggaaaggctcttggatgagtctgacaag
tatgaggcagttgtatgtaatgaatgtggaatgttagcagtatatgataagaataagaac
aagatgtactgtcctatatgtggagacagtgaaacttatcctgttgagatttcatatgca
tttaaattgttgttagatgaacttaaaagtttatgtattttccctaaattaattcttggg
gacaaagcttaa
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