Methanobrevibacter ruminantium: mru_1855
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Entry
mru_1855 CDS
T01166
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
mru_1855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mru03400
]
mru_1855
Enzymes [BR:
mru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
mru_1855
DNA repair and recombination proteins [BR:
mru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
mru_1855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADC47705
UniProt:
D3DZM7
LinkDB
All DBs
Position
complement(2387524..2388360)
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AA seq
278 aa
AA seq
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MKDKVIFGPAGKPIDFKGKAFESPEYLGPRGLYAFEYQSTYGVRIGESSAIKLRESAERN
GVLMSMHCPYYINVCSKEEEKIDSSIERLIQSAKVGEYMGAYRLVFHPGFYSNRKADVCM
DLAKETYRRLLLRCEEEGIEDFTFAPETTGKRSQLGNIDEIIEMCASFDHFEPTIDFAHV
HARGRGILNKKDDYNCIFSKLEDNLDIDRLHCHFTTIEYSHKGERKHHTLAEGDEYGPHI
KDLLLNLIENDWKATIICETPLIDQDALRMKKLYDSLI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaggttatttttggtccagcaggtaagccaattgattttaagggaaaggca
tttgaatctccagaatatttaggtccaagggggctttatgcatttgaatatcagtccact
tatggcgtaaggataggggagtcatctgcaataaagcttagagagtctgcagagagaaat
ggggttttaatgtccatgcattgtccttattacattaatgtatgttctaaagaggaagaa
aagattgatagctccatagaaagactgattcaatctgctaaggttggagaatatatgggt
gcctacaggcttgttttccacccaggattctattcaaacagaaaggctgatgtctgtatg
gatttggctaaggaaacctataggaggctccttttaagatgtgaagaggaagggatagag
gactttacctttgctccagagactacaggaaagcgttcacagttaggaaatatcgatgag
ataattgaaatgtgcgccagctttgaccatttcgagccaacaatcgactttgcccatgtt
catgcaagagggcgcggaatattaaataagaaggacgattataactgcatattctcaaag
cttgaagacaatctggacattgacaggcttcattgccatttcactacaattgaatactcc
cacaagggagagagaaagcaccatactctagctgaaggtgatgaatatgggcctcacatt
aaagatttattgctcaatctgattgaaaacgattggaaagccactataatctgtgaaact
cctttgattgaccaggatgccttaagaatgaagaagctttatgacagtttgatatga
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