Methanobrevibacter ruminantium: mru_1888
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Entry
mru_1888 CDS
T01166
Symbol
pycB
Name
(GenBank) pyruvate carboxylase subunit B PycB
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru00020
Citrate cycle (TCA cycle)
mru00620
Pyruvate metabolism
mru00720
Other carbon fixation pathways
mru01100
Metabolic pathways
mru01120
Microbial metabolism in diverse environments
mru01200
Carbon metabolism
mru01230
Biosynthesis of amino acids
Module
mru_M00620
Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
mru_1888 (pycB)
00620 Pyruvate metabolism
mru_1888 (pycB)
09102 Energy metabolism
00720 Other carbon fixation pathways
mru_1888 (pycB)
Enzymes [BR:
mru01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
mru_1888 (pycB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
Biotin_lipoyl
HMGL-like
Biotin_lipoyl_2
HlyD_D23
HlyD_3
GCV_H
YqfD
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ADC47738
UniProt:
D3DZR0
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All DBs
Position
2428555..2430276
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AA seq
573 aa
AA seq
DB search
MKVKITETAFRDAHQSLLATRMRTRDMVPIAEEMDKVGYHAIEAWGGATFDTCIRFLNED
PWERLRILKENFTNTPLQMLLRGQNLLGYKHYADDIVTKFVEKSYENGVDIFRIFDAMND
IRNMEQSIKVAKAQGAHVQGTISYTISPVHTVDKFVEFAKELEALECDSIAIKDMAGLIS
PAVVFELVSRLKEETDLLVNLHSHCTSGITPISYYAACQAGVDILDTAISPLAWGTSQPP
TESIVASLQGTEYDTGLDLKTLNQIKKYFETLRAKYEGYIDPISERIDTDVLMYQIPGGM
LSNLISQLKQQNALDRYQDVLEEMPRVREDMGYPPLVTPTSQIVGIQAVMNVINGERYKI
VSNEVKDYMKGYYGRAPAPINEEIAKKIIGDEERITCRPADLIEPEYDKFKKEAEDLKNF
EKEEDVLTLAMLPPVAKQFLNGEIKEEDFPEKKVIDDGGISAIPTEYSVEVDGDVFDVKI
MPTGYIKIDGEGSEPAPVIEGAITASMQGMVLKIKVNTGDKVQKGSVVAVLEAMKMENDI
YAEEDGIVEQIFVEEGDTVNAGDNIMVIKGLDE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaaaataactgaaaccgcattcagagatgctcaccaatcccttttagcaacc
agaatgagaacaagagatatggttcctattgctgaagagatggataaagtaggatatcat
gcaattgaagcatggggcggagcaacctttgacacttgtataagatttttaaacgaagat
ccatgggaaagacttagaatattaaaagaaaactttaccaacactcctctacaaatgctc
ttaagaggtcaaaacttactcggatacaaacattatgcagatgacattgtaaccaaattc
gtagagaaatcctatgagaacggtgttgacatctttagaatattcgatgctatgaacgat
attagaaacatggaacaatccattaaggtagctaaggctcaaggagctcatgttcaagga
acaatcagctacacaatcagcccagttcatactgtagacaagtttgtggaatttgctaaa
gagcttgaagcattggaatgtgattcaatagccattaaggatatggcaggtttaatcagt
cctgctgttgtctttgaattggtttcaagattaaaggaagaaactgacttgcttgtcaac
ttgcattcacactgtacaagcggtatcactccaatcagttattacgctgcttgtcaagcc
ggagttgacattttagacactgcaatctctccattggcttggggtacttcacagcctcct
accgaaagtattgtagcatccctgcaaggaactgaatatgataccggattggaccttaag
acattaaaccaaatcaagaaatactttgaaacccttagggcaaaatacgaaggctatatt
gacccaatcagtgaaagaatcgacactgacgtattgatgtatcaaatccctggaggaatg
ctttccaacttaatttcacaattaaaacagcaaaacgcattggacagataccaagacgta
ttggaagaaatgcctcgcgtaagagaggatatgggatatcctccacttgtaactccaaca
agccagattgtaggtattcaagctgtaatgaatgtaatcaatggagaaagatacaaaatc
gtatctaacgaagttaaagattatatgaaaggttactatggccgtgctccagcaccaatc
aatgaagaaatcgccaaaaagatcattggtgatgaagagcgtatcacctgcagacctgca
gacttgattgagcctgaatatgacaagttcaagaaagaggctgaagaccttaagaacttc
gagaaggaagaggatgttctcacccttgcaatgttacctccagtagctaagcaattcctt
aacggagaaatcaaggaagaagacttcccagagaaaaaggttatagatgatggcggaatc
agtgccattcctactgaatactctgtagaggttgatggtgatgtctttgatgtaaagatc
atgccaaccggatacataaagattgatggagaaggcagtgagccagctccagttatcgaa
ggtgctattactgcatccatgcaaggtatggttcttaaaatcaaggtaaacactggagat
aaagtacaaaaaggctctgttgtagcagttcttgaagctatgaagatggaaaacgatatt
tatgccgaagaggatggtattgttgaacaaatattcgtagaagaaggagacactgttaac
gcaggagataatataatggtaattaaaggattagatgaataa
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