Mucilaginibacter rubeus: DEO27_001060
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Entry
DEO27_001060 CDS
T06362
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mrub
Mucilaginibacter rubeus
Pathway
mrub03410
Base excision repair
mrub03430
Mismatch repair
mrub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DEO27_001060 (recJ)
03430 Mismatch repair
DEO27_001060 (recJ)
03440 Homologous recombination
DEO27_001060 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrub03400
]
DEO27_001060 (recJ)
DNA repair and recombination proteins [BR:
mrub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DEO27_001060 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DEO27_001060 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DEO27_001060 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
QEM08663
UniProt:
A0A5C1HTA7
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All DBs
Position
253296..254993
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AA seq
565 aa
AA seq
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MNKRWALKDNTNHDDVIKLAAELNIDTVLSTMLVQRGITTFEDARYFFRPDHRHLHDPFL
MQDMEKAILRIEQAIAAGEKIMIYGDYDVDGTTAVALTYSFFKKLYNNIDYYIPDRYKEG
YGISTQGIDYAAEHGISLIIALDCGIKSIDKIDYANEKGIDFIICDHHLPGASIPNAVAV
LDPKREDCEYPYKELSGCGIGFKLIQAYAEKNDIPIEEVNCYLDLVVISISCDIVHITGE
NRVLAHFGLQKINTDPCIGVKALMEIAGRTGPYTISDVVFLLGPRINAAGRIDDAKHAVE
LLIATDKDAAKEKSAMINVRNTERKGHDLSITDEALGMIDNDEVLIARKSTVVFNEDWHK
GVIGIVASRLTEKYYRPTIVLTRSNGHVAGSARSVLGYDLYEALCGCKDLLIQFGGHKYA
AGLTMEPENLEAFIERFEEVVSSTIKPEQLIQQIQIDAELRLSQIEPKFFRILNQFAPFG
PENMAPVFISKNVYVSGNAGLVGGSHIKMSVMQEGSAAFDCIAFNHGQYLEQLRPGVPFE
MCYSIEENVWRERRTIQLNVKGIRF
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgttgggcgctaaaggataatacaaaccatgatgatgtaataaaattagcc
gccgaactcaatatcgataccgttttaagcaccatgcttgtgcagcgcggtatcaccact
tttgaagatgcccgctactttttcaggcccgatcaccggcacctgcatgaccccttcctg
atgcaggatatggaaaaggcgatactgcgtattgagcaggccatagccgcgggcgaaaaa
atcatgatttacggggattatgacgtggatggtactacagccgtggcgcttacctacagt
tttttcaaaaagctttataacaatattgattattatatccccgatcgttacaaggaaggg
tatggcatctctacccagggaattgactatgccgctgagcatggtattagcctgatcata
gcgctcgattgcggcattaaatcaattgataaaatcgactatgcaaatgaaaaaggcatt
gattttatcatctgcgatcaccacttgccgggagcatcaattcctaacgcggtggctgtg
cttgaccctaagcgcgaagactgcgaatatccatataaagaattatccggttgtggcatc
ggctttaaactgatccaggcttacgccgaaaagaatgatatcccgattgaggaagtaaac
tgctatctcgacctggtagtgatcagtatctcctgcgatatcgtgcatatcactggtgaa
aacagggtgctggcgcatttcggtttgcaaaaaataaataccgacccatgtattggcgtt
aaggcgttaatggagatagcggggaggacggggccatatacgatatcggatgtggtattt
ttgcttggcccgcgtattaatgctgccggcaggatagacgatgccaaacatgccgttgaa
ctcctgatagcgacagataaggatgccgctaaggaaaaaagcgccatgatcaatgtacgc
aataccgaacgaaaagggcatgacctctccattaccgacgaagcgctcggcatgattgac
aatgatgaggtgctgatcgcccgtaaatcaaccgttgtatttaacgaagactggcataag
ggggttattggtatagtggcctctcgcctgaccgagaaatattatcgcccaacaattgtg
cttacccgttctaacggccatgttgcaggttcggcacgttctgttttgggttatgattta
tacgaagccctttgtggatgtaaagacctgttgattcagtttggcgggcacaaatatgct
gccggtttaactatggagccagaaaaccttgaagcctttattgaaaggtttgaagaggtg
gtaagctcaaccataaaaccggaacaattgatacaacaaatacaaattgacgctgaatta
cgtttaagccagatagaacccaaatttttcaggattttgaatcagtttgcgcccttcggg
cctgaaaatatggcccccgttttcataagtaaaaatgtgtatgttagtggtaacgccggt
ttggtaggtggttcgcatattaaaatgagcgtaatgcaggaaggatcggcagcgtttgac
tgcatagcctttaaccacggccaatatctggaacaattgcggcctggtgtgccgtttgaa
atgtgctattcgatagaagaaaacgtttggcgcgaaagaagaacgatacagttaaatgtg
aagggaattagattttag
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integrated database retrieval system
