Mucilaginibacter rubeus: DEO27_004090
Help
Entry
DEO27_004090 CDS
T06362
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mrub
Mucilaginibacter rubeus
Pathway
mrub02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mrub00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DEO27_004090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrub03021
]
DEO27_004090
Transcription machinery [BR:
mrub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DEO27_004090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
PgaD
HTH_28
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
QEM09228
UniProt:
A0A364WMQ3
LinkDB
All DBs
Position
complement(1014436..1015296)
Genome browser
AA seq
286 aa
AA seq
DB search
MRQLKITQSITNRESQSLDKYLHEIGKVDLITAEEEVILAQKIREGDQAALERLTKTNLR
FVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETKGFKFISYAVWWIRQSILQAIAE
QSRIVRLPLNQVGSLSKISKAFSKLEQEYEREPSPEELADILETTVDKISDTLSNSGRHV
SMDAPFVQGEENTLLDVLENQEPNTDSILINESLSEEIKRSLSTLTEREREIIVLFFGLG
TNHPLSLEEIGEKFNLTRERVRQIKDKALQRLRHTSRSKILKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaaaataacgcaatccattaccaatcgcgagtcacaatcgcttgacaaa
tatctgcacgagattggtaaagttgacctaataactgctgaagaagaagtaattttagct
cagaagatccgcgagggcgaccaggcggcattagaacgcctcaccaaaaccaaccttcgc
tttgttgtatctgttgctaaacaatatcaaaaccagggtcttactttaggcgatttgatt
aacgaaggcaaccttggtttgattaaagctgcaaaacgttttgatgaaacaaagggcttc
aaattcatttcatacgctgtatggtggatccgtcaatctatattacaggctatcgccgag
caatcgcgtattgtgcgtttaccgcttaaccaggtaggttcattaagcaaaatcagtaaa
gctttttctaagcttgagcaggagtatgagcgtgagccatcgcctgaagagcttgccgat
atcctggaaaccaccgttgataagatctctgatacgctaagcaactctggccgtcatgta
tcaatggatgcaccgtttgtacagggtgaagaaaatacgctgcttgacgtactggaaaac
caggaaccaaacaccgattcgatcctgatcaacgagtcattatctgaagagatcaaacgt
tcactatcgacccttaccgagcgtgagcgtgaaatcattgtactattcttcggtttaggc
accaatcacccgctttcattagaggaaattggcgaaaagttcaatctgacccgcgagcgt
gtacgccagatcaaggataaagccttacaacgtctccgtcatacctcaaggagcaaaatc
cttaaatcatacttaggttaa
DBGET
integrated database retrieval system
