KEGG   Mucilaginibacter rubeus: DEO27_004100
Entry
DEO27_004100      CDS       T06362                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mrub  Mucilaginibacter rubeus
Pathway
mrub00010  Glycolysis / Gluconeogenesis
mrub00020  Citrate cycle (TCA cycle)
mrub00260  Glycine, serine and threonine metabolism
mrub00280  Valine, leucine and isoleucine degradation
mrub00310  Lysine degradation
mrub00380  Tryptophan metabolism
mrub00620  Pyruvate metabolism
mrub00630  Glyoxylate and dicarboxylate metabolism
mrub00640  Propanoate metabolism
mrub00670  One carbon pool by folate
mrub00785  Lipoic acid metabolism
mrub01100  Metabolic pathways
mrub01110  Biosynthesis of secondary metabolites
mrub01120  Microbial metabolism in diverse environments
mrub01200  Carbon metabolism
mrub01210  2-Oxocarboxylic acid metabolism
mrub01240  Biosynthesis of cofactors
Module
mrub_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mrub_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mrub_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mrub00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DEO27_004100 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DEO27_004100 (lpdA)
   00620 Pyruvate metabolism
    DEO27_004100 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DEO27_004100 (lpdA)
   00640 Propanoate metabolism
    DEO27_004100 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DEO27_004100 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DEO27_004100 (lpdA)
   00310 Lysine degradation
    DEO27_004100 (lpdA)
   00380 Tryptophan metabolism
    DEO27_004100 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DEO27_004100 (lpdA)
   00670 One carbon pool by folate
    DEO27_004100 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mrub04147]
    DEO27_004100 (lpdA)
Enzymes [BR:mrub01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DEO27_004100 (lpdA)
Exosome [BR:mrub04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DEO27_004100 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like DAO NAD_binding_8 GIDA Lys_Orn_oxgnase FAD_binding_3 Thi4 3HCDH_N 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: QEM09230
UniProt: A0A5C1HVW7
LinkDB
Position
complement(1016629..1018020)
AA seq 463 aa
MDYDVIVIGSGPGGYVAAIRASQLGLKTAIVEKESLGGICLNWGCIPTKALLKSAQVFEY
LNHSTDYGIKINGAGEVDFASVVKRSRNVADGMSKGVQFLMKKNKIDVLVGFGKLKSKGV
VEVKAADGSAKTYSAKHIILATGGRSRELPNLKQDGKKVIGYRQAMVLPQQPKSMIVVGS
GAIGIEFAYFYNAIGTKVTVVEYLDNIVPLEDEDVSKALNRILKKQGINIMTSSNVEAVD
TSGDLCKVTVKTATGTETLEAEIVLSAVGIATNLEGIGLEENGVKTDRGKVLVDDFYRTN
VEGVYAIGDIVKGQALAHVASAEGIICVEKIAGENPHPLDYNNIPGCTYCSPEIASVGYT
EKAAKEAGYEIKVGKFPFSASGKASAAGAKDGFVKVIFDAKYGEFLGAHMIGYNVTEMIA
EVVTARKLEATGHEIIKSVHPHPTMSEAVMEAAAEAYGECIHL
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggattacgatgtaattgttattgggtctggtccgggtggctatgttgctgctatccgc
gcttcccagcttggtttaaaaaccgccattgttgaaaaagaatcattaggcggcatctgt
ttgaactggggttgtatcccaaccaaggctttattaaaaagcgcccaggtttttgaatac
cttaaccacagtaccgattatggtattaaaattaacggcgccggcgaagttgattttgcc
tcagttgttaaaagaagccgtaacgttgccgatggcatgagcaaaggcgttcagtttttg
atgaagaaaaacaagattgatgttcttgttggctttggtaaattgaaaagcaaaggtgtt
gttgaagttaaagctgccgatggttcagctaaaacctacagcgcgaaacacattatatta
gctacaggcggtcgttcacgcgagttgcctaaccttaaacaggacggcaaaaaggtaatc
ggctatcgccaggccatggtattgcctcagcagccaaaatcaatgatcgtagttggttct
ggcgctatcggtatcgagtttgcttatttctataacgctataggcaccaaagttaccgtt
gttgaataccttgataacatcgttccgcttgaggacgaagatgtatcaaaagcattaaac
cgtatccttaaaaaacaaggcatcaatattatgaccagctcaaatgttgaagcggttgat
accagcggcgatctgtgcaaagtaactgtaaaaacagctaccggtaccgaaacccttgaa
gctgaaatcgttctttctgcagtaggtatcgctactaaccttgaaggcattggccttgaa
gaaaacggcgttaaaaccgatcgtggtaaagtattggttgatgatttttaccgtaccaac
gttgaaggcgtttatgctatcggcgatatcgttaaaggtcaggcccttgctcacgtagct
tctgccgaaggcatcatctgcgttgaaaaaattgccggcgaaaaccctcacccgcttgat
tataacaacatcccgggctgtacttattgctcgcctgagattgcttctgttggttacacc
gaaaaagcagctaaagaagccggttacgaaattaaagttggtaaattcccattctcagct
tcgggtaaagcaagtgctgccggtgctaaagatggtttcgtaaaagtgatatttgatgcc
aaatacggtgagttcttaggtgctcacatgattggttacaatgttaccgaaatgattgcc
gaagtagttaccgcacgtaagttagaagctaccggtcatgagatcatcaaatcggtacat
cctcacccaaccatgagtgaagctgtaatggaagccgcagccgaagcttacggcgagtgt
atccacttgtag

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