Mucilaginibacter rubeus: DEO27_006715
Help
Entry
DEO27_006715 CDS
T06362
Name
(GenBank) AAA family ATPase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mrub
Mucilaginibacter rubeus
Brite
KEGG Orthology (KO) [BR:
mrub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrub03009
]
DEO27_006715
03012 Translation factors [BR:
mrub03012
]
DEO27_006715
Enzymes [BR:
mrub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DEO27_006715
5.6.2.5 RNA 5'-3' helicase
DEO27_006715
Ribosome biogenesis [BR:
mrub03009
]
Eukaryotic type
Other ribosome biogenesis factors
DEO27_006715
Translation factors [BR:
mrub03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
DEO27_006715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
ResIII
UvrD-helicase
Helicase_RecD
PhoH
PIF1
AAA_22
DEAD
Herpes_ori_bp
AAA_16
T2SSE
UvrD_C_2
ATPase_2
SLFN-g3_helicase
nSTAND3
UvrD_C
AAA_25
AAA_5
HEM4
AAA_14
NPHP3_N
DAP3
AAA_24
ABC_tran
AAA_7
Flavi_DEAD
AAA
cobW
TraI_hel_assoc_N
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QEM09724
UniProt:
A0A5C1HVA0
LinkDB
All DBs
Position
complement(1656030..1657940)
Genome browser
AA seq
636 aa
AA seq
DB search
MDYFKKLLNLLQIEQDEDRQAYLKLTETSSATERRAAGLTWYPIAIKGTEIGRGDYLTVE
VERPSHQDLSHQFRFGASAALFSNHDAKTDRINGTVSYQGGNRLKLTLNTDELPDWSRNG
KLGIDLLFDDNSYDEMQKALKLSAKLVDDNKEGHLTRVLTGQSAPSFVSETIHSPLNGLN
ASQQQAVHKIVDAQELAVVHGPPGTGKTTTLVQAIKALIKHNKQQILVVAPSNTAVDLLS
EKLSNEGLNVLRIGNPARVSEKLMSLTLDSRISTHADMKEIKKLKKQASEYKNMAHKYKR
NFGKAERDQRKALFDAAHQIIKEVDKTEQFIAEDLISKAQIITATLVGANHYTIRDLKFN
TVVIDEAGQALEPACWIPISKAKKVILAGDHLQLPPTIKSQQAAKEGLSITLLEKCAALY
PEAVVLLEEQYRMNEAIMGFSSKEFYDDRLKAHESVASRLLFPGDIPLSFVDTAGCGFDE
KQEGTSTANPEEAAFLFKHLHKLVGELREHYTPENFPTIAVISPYKEQIRVLNQLLLDSP
DLLIYADKIAVNTIDSFQGQERDVVYISLTRSNTNGEIGFLSDIRRMNVAMTRARKKLVM
IGDSSTLAYAPFYADMISYAEQLNGYQSAWDYAGYD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggactattttaaaaaactgcttaacctattacaaattgagcaggacgaagaccgccag
gcttacctcaaattaacggaaacatcttcggccactgagcgaagggcagcagggcttacc
tggtatcccatagccattaaaggcaccgaaataggcagaggtgattacctcactgtcgaa
gttgagcggccatcgcaccaggatcttagtcaccagttcaggtttggcgcctcggcagcc
ttgttttcaaaccatgatgccaaaacagatcgtataaacggaaccgtttcataccagggc
ggtaaccggctaaaactaacccttaataccgacgaattaccggactggagccgtaacggc
aagctcggcatcgatctgttgtttgacgacaacagctacgatgaaatgcagaaagcgctt
aaattatctgctaaactcgttgatgataacaaagaaggtcaccttacccgcgtactaacc
ggccaaagtgcaccgtcttttgtttccgaaaccattcattccccgcttaatggcttaaat
gcttcacaacaacaagccgtccataaaatagttgacgcgcaggagctggccgtagttcat
ggccctccgggtaccggtaaaacaaccacactcgtgcaggccattaaagcccttatcaaa
cataataagcaacagattttggtggtagccccgagcaatactgctgttgatctcctgagc
gaaaagctaagtaatgaaggcttaaacgtactccgtattggcaacccggccagggtatct
gaaaaactgatgtcgctgactttagatagcaggataagtacccatgccgacatgaaggag
atcaagaagcttaaaaagcaggcttctgagtacaaaaacatggcgcataaatacaagcgc
aattttggcaaggccgagcgcgaccagcgtaaggcgctttttgacgcggcacatcaaatc
atcaaagaagtagataaaaccgaacaatttattgccgaagacctgatcagtaaagcacag
atcattacagccacgcttgtaggcgccaatcactataccatccgcgatttaaaattcaac
acggtagttattgacgaagccgggcaggcgcttgagcctgcctgctggatcccgatatca
aaagcaaaaaaagtgatcctcgccggcgatcatttgcaactcccgcctaccatcaaatca
cagcaggcggcaaaggaaggactgagcatcaccttgcttgagaaatgcgccgccttatat
cccgaagcggttgtgttacttgaagaacaataccggatgaacgaggccatcatgggcttt
tcgtcaaaggagttttatgatgacaggttaaaagcccatgagtcggtagcaagccggttg
ttattcccgggagatattccgcttagttttgtggataccgccggatgtggttttgatgaa
aagcaggaaggtacaagcacagcaaatcctgaagaagccgcgtttctgttcaaacatctt
cataaactggttggcgaactccgggagcattataccccggaaaacttcccaaccattgcc
gttatctccccttataaagaacagattcgggtgctgaaccaattactattggactcaccg
gatttgttgatctacgccgataaaatagcggttaacactattgatagtttccaggggcag
gagcgtgatgtggtttatatcagcctcacccgtagcaacaccaacggcgagataggcttc
ctgagcgatattcgccgcatgaatgtggccatgacccgtgcacgcaaaaaactggtgatg
ataggtgatagttcaacgcttgcttatgctcccttttatgcagatatgatcagttatgcc
gaacaactaaacggttatcaaagcgcctgggattacgcaggttacgattaa
DBGET
integrated database retrieval system
