Mucilaginibacter rubeus: DEO27_010715
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Entry
DEO27_010715 CDS
T06362
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mrub
Mucilaginibacter rubeus
Pathway
mrub02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mrub00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DEO27_010715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrub03021
]
DEO27_010715
Transcription machinery [BR:
mrub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DEO27_010715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QEM10476
UniProt:
A0A5C1HX36
LinkDB
All DBs
Position
complement(2628733..2629587)
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AA seq
284 aa
AA seq
DB search
MRDLNITQSITARDAASLEMYFSDIAREPTINAEEEVVLAGKIRQGDLSALHKLVKANLR
FVVSVAKKYQHQGMPMGDLISEGNLGLLEAAKRFDETRGFKFISYAVWWIRQRIMEALLD
KTRMIRLPANQVDMIVHVNRATGVLEQRLERLPAQDEIADFLETAEWKVKEALYVAPFTH
SYDKADTTGDDGYSLLDRLNSDEPGVESFLEASQLKQQLDELLGKLNTAERSVIFYHYGL
DGHSELSAPEIGSRLGVSAERVRQLRNRAIDKLREKASLQKLEV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagagacctgaatattacccaatccatcaccgcccgtgatgctgcttcgctggagatg
tatttcagcgacattgcccgtgagcctacaattaatgcagaggaagaagttgtattagcc
ggaaagatcaggcagggcgacttatcggctttgcataagcttgtaaaggctaacctgcgt
tttgtggtttcggtggcaaaaaaatatcagcaccagggcatgcccatgggcgacctgatt
agtgagggtaatttaggcttgcttgaagccgctaaacggtttgacgaaacacgtggcttc
aagttcatttcgtatgccgtatggtggatcaggcagcgcatcatggaggcattactcgat
aaaacccggatgatccgcctgcctgctaaccaggtggatatgattgttcatgttaacagg
gcaaccggcgttttagaacaacggttggaacggctacctgcccaggatgaaatagccgat
tttttggaaactgccgaatggaaagtaaaagaagcgctgtatgtagccccctttacacat
tcatatgataaggcggatacaactggcgacgacgggtatagcttactcgatcgcctaaac
agcgatgaacccggagttgaaagttttctggaagcttctcaattgaaacaacaacttgat
gagttacttggcaagctaaacacggccgagcgatcagttatattctatcattatgggctt
gatgggcacagcgaactctccgctcctgaaatcggaagtaggcttggcgttagtgccgag
cgggtgaggcagctaagaaaccgggctattgataagctaagggaaaaagccagcctgcaa
aaacttgaagtttaa
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