Mucilaginibacter rubeus: DEO27_013025
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Entry
DEO27_013025 CDS
T06362
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
mrub
Mucilaginibacter rubeus
Brite
KEGG Orthology (KO) [BR:
mrub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrub03000
]
DEO27_013025
Transcription factors [BR:
mrub03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DEO27_013025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Peripla_BP_3
LacI
Sigma70_r4_2
HTH_23
Sigma70_r4
HTH_7
HTH_Tnp_ISL3
HTH_11
HTH_5
HTH_17
HTH_24
HTH_Crp_2
MarR_2
HTH_IclR
HTH_38
HTH_28
Sigma54_DBD
HTH_3
MarR
HTH_10
HTH_AraC
HTH_20
MerR
Xre-like-HTH
HTH_29
PF0610-like_N
HTH_26
Crp
Rv2175c_wHTH
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
QEM10905
UniProt:
A0A5C1HYV8
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Position
3341093..3342124
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AA seq
343 aa
AA seq
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MQTKPTTIKEIAQILGISVSTVSRALHDHPSIGLTTRAKVKKLAGELNYEPNQTAIFLQK
GKTLTIGVILPELSEAFFSSAISAIEDTAYKKNYTVLLAQSHDDEQKEKQLVEKMKNHRV
DGLLVSVGKNTSSYQHFENLKKYNIPVVYFDRIPSIPNIHYVACNMEIGTIEAVSYLLKK
GHRAIGMINGPQTMVATGERKEGYIKAMTKNRLKYDPSLIVSCDLTEEGTKKALDELLAS
KRKPTAIVTFNDYVALFAIKHAVKLNIKVNKDLEFVSYANLPLINYMENIPAASVEQFPY
LQGQKATDILMDLLHHQGTGGNEPSAFYKVIIESQLVENKKQD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaagccaactactataaaagaaatagcgcaaatattaggcatctctgtgtct
acagtttcaagggccttgcatgaccatcccagcatagggctaaccacaagggcgaaagtt
aaaaaactggccggcgaactcaattacgagcccaatcaaacagccatctttttgcaaaaa
ggcaaaactctaactataggagttattttaccagaactttcggaagcattcttttcatcg
gctataagtgccattgaagataccgcttataaaaagaactatacggtattgctagcgcaa
tcacacgatgacgagcaaaaagaaaagcaactggttgaaaaaatgaaaaatcaccgggtt
gatggtttattggtatcggttggaaaaaatacatcctcctaccagcatttcgaaaattta
aaaaagtataatatcccggttgtttatttcgacaggatcccatctattcccaacatccat
tatgtggcctgcaatatggagattggcaccattgaagccgtcagttatcttttgaaaaaa
ggccaccgcgccattggtatgatcaacgggccacaaaccatggtagccaccggcgagcgt
aaagagggctacatcaaagccatgactaaaaacaggctcaagtatgatccatcgcttata
gtttcctgcgatttgaccgaagaaggcaccaaaaaagctttggatgaactgttggccagc
aaacgcaaaccaaccgccattgtaacctttaatgattacgtggcgctttttgccattaag
catgcggtcaaattaaatatcaaggtcaataaagatctggaatttgtaagctacgccaat
ttaccactcatcaactatatggagaatattccagcagcttcggttgagcaatttccttat
ttacagggacaaaaggcaactgatatcctcatggacctgctgcatcaccagggcacaggc
ggcaacgaaccgagcgccttttataaggtgatcattgaatcgcagctggtcgaaaacaaa
aaacaagactaa
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