Mucilaginibacter rubeus: DEO27_020200
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Entry
DEO27_020200 CDS
T06362
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mrub
Mucilaginibacter rubeus
Brite
KEGG Orthology (KO) [BR:
mrub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrub03016
]
DEO27_020200 (miaB)
Enzymes [BR:
mrub01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DEO27_020200 (miaB)
Transfer RNA biogenesis [BR:
mrub03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DEO27_020200 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QEM12244
UniProt:
A0A5C1I3C0
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All DBs
Position
complement(5110697..5112130)
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AA seq
477 aa
AA seq
DB search
MMDLLIPDKTHDESRQGEALMLKAEAAKNNGRKLYIESYGCAMNFSDSEIVASILAERGF
ETTSDYSIADVIFINTCSIRENAEQRVRNRLKEFTVAKVKNPGLVVGVLGCMAERLKSKF
LEEEKLVDVVVGPDAYRDLPNLIDQVDDGQKAVNVLLSREETYADISPVRLNSNGINAFV
SIMRGCDNMCSFCVVPFTRGRERSRDPLSIVAECRDLFDKGYREVTLLGQNVDSYKYSTT
GEEVITTNFANLLEMVALINPDLRVRFSTSHPKDITDDVLYAINKYDNICNYIHLPVQSG
NSRILDLMNRTYDREWYINRIDAIRRIIPDCAISTDVITGFCSETDDEHKETVSMMDYVK
YDFAYMFKYSERPGTLAAKRYADDIPEEVKQKRLTEIVAKQQEYSFYRMQARIGRVERVL
IEGFSKKSDKDYCGRSDQNAMVIFPVGENYKPGQYVNVLIERSTTATLIGKVIPQTP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatggatttgcttattccggataaaacacatgatgagagcaggcagggtgaggcgtta
atgttaaaagccgaagcagctaaaaataatggccgtaagctttatattgaaagctatggc
tgcgccatgaacttttctgatagtgagatcgtagcttctattttagccgagcgtggtttt
gaaaccacgtccgactatagcattgccgatgttattttcatcaatacctgttctatccgc
gaaaacgccgaacagcgtgttcgcaaccgtttaaaagagttcaccgttgccaaagtaaaa
aatccgggattggttgtgggcgtactgggctgcatggccgaacgtttgaaatcaaaattc
ctggaagaagaaaaattagttgacgttgttgttggtccggatgcttaccgcgatttgcca
aacctgattgaccaggttgatgatgggcaaaaggcagttaacgtattgctatcgcgcgag
gaaacttacgccgatattagtccggtgcgtttaaacagcaatggcatcaatgcctttgta
tctattatgcgcggatgcgataacatgtgttcgttttgcgtagtgccatttacccgtggc
cgtgagcgcagccgcgatcctttatcgatagtagcagaatgtcgcgatctgtttgataaa
ggttaccgtgaagtaaccttgttgggccaaaatgtggattcatacaaatattcaaccacc
ggagaagaggttataactacaaactttgctaacctactggagatggtagcgctgataaat
cccgacctgagggttaggttttcaacctcgcatccgaaggatattaccgatgatgtgctt
tatgccatcaataaatacgataacatctgtaattatatccacctgccggtacaatcgggc
aatagccgcatccttgatctgatgaaccgcacttacgatcgcgagtggtatatcaacagg
atagacgctattcgccgtatcatccctgattgtgcgatatcaaccgatgtaattaccggt
ttttgcagcgaaaccgacgatgagcataaggaaacggtaagcatgatggattatgtgaag
tacgactttgcttacatgtttaaatacagcgaaaggccaggtactttggctgcaaaacgt
tatgcggatgatattccagaagaagtgaagcaaaagcgcttaaccgaaatagtagcaaaa
cagcaggaatattcattttacaggatgcaggcccgcataggcagggtagagcgcgtgctg
atagaaggtttttctaaaaaatctgataaagactattgcggccgcagcgatcaaaatgcg
atggtaattttcccggttggcgaaaattacaagccaggtcaatacgtaaacgtacttatc
gagcgcagcacaacggctactttgatagggaaagttatcccccaaaccccctaa
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