KEGG   Mucilaginibacter rubeus: DEO27_023130
Entry
DEO27_023130      CDS       T06362                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mrub  Mucilaginibacter rubeus
Pathway
mrub00010  Glycolysis / Gluconeogenesis
mrub00020  Citrate cycle (TCA cycle)
mrub00260  Glycine, serine and threonine metabolism
mrub00280  Valine, leucine and isoleucine degradation
mrub00310  Lysine degradation
mrub00380  Tryptophan metabolism
mrub00620  Pyruvate metabolism
mrub00630  Glyoxylate and dicarboxylate metabolism
mrub00640  Propanoate metabolism
mrub00670  One carbon pool by folate
mrub00785  Lipoic acid metabolism
mrub01100  Metabolic pathways
mrub01110  Biosynthesis of secondary metabolites
mrub01120  Microbial metabolism in diverse environments
mrub01200  Carbon metabolism
mrub01210  2-Oxocarboxylic acid metabolism
mrub01240  Biosynthesis of cofactors
Module
mrub_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mrub_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mrub_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mrub00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DEO27_023130 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DEO27_023130 (lpdA)
   00620 Pyruvate metabolism
    DEO27_023130 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DEO27_023130 (lpdA)
   00640 Propanoate metabolism
    DEO27_023130 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DEO27_023130 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DEO27_023130 (lpdA)
   00310 Lysine degradation
    DEO27_023130 (lpdA)
   00380 Tryptophan metabolism
    DEO27_023130 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DEO27_023130 (lpdA)
   00670 One carbon pool by folate
    DEO27_023130 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mrub04147]
    DEO27_023130 (lpdA)
Enzymes [BR:mrub01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DEO27_023130 (lpdA)
Exosome [BR:mrub04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DEO27_023130 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like NAD_binding_8 GIDA DAO FAD_binding_3 Thi4 Lys_Orn_oxgnase AlaDh_PNT_C IFT46_B_C 3HCDH_N
Other DBs
NCBI-ProteinID: QEM12779
UniProt: A0A5C1I4H2
LinkDB
Position
complement(5792299..5793702)
AA seq 467 aa
MQYDVIVIGSGPGGYVAAIRCAQLGLKTAIVEKYNTLGGTCLNVGCIPSKALLDSSEHYH
NAAHAFKTHGINLENLTIDFGQMIKRKQQVVDANTSGISYLMKKNKIDTHFGVGSFKDKN
TIVVKKSDGTTTEITAKNVIIATGSKPSALPFLPIDKKRVITSTEALSLSEVPKHLVLIG
GGVIGLELGSVYARLGAKVSVIEFMDGIIPTMDKGLGRELQKVLTKLGMEFYLGHKVTGA
TVKGKEVTVSCDTPKGEKLELKGDYCLVAVGRIAYTDGLGLENIGITVEERGRKITVDEH
LETKVKGVYAIGDVIKGAMLAHKAEDEGTLVAEIIAGQKPHIDYNLIPGVVYTWPEVAAV
GQTEEQLKAAGVKYKTGSFPFKASGRARASGDLDGFVKVLADATTDEILGVHMIGPRAAD
MIAEAVVAMEYRASAEDISRMSHAHPTYTEAMREACLAATENRAIHI
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcaatatgatgttatagttataggttcgggccccggtggttatgtagccgctatccgt
tgtgcccagcttggtttaaaaaccgcaattgttgaaaagtataatacccttggcggtacc
tgcctcaatgttggctgtatcccgtcaaaggcgctgcttgattcatctgaacattaccat
aatgctgcccatgcttttaaaacacatggcatcaaccttgaaaacctgactatcgatttt
gggcagatgatcaaacgtaaacaacaggttgttgacgctaataccagcggtatcagctac
ctgatgaagaaaaataaaattgatacccattttggtgtgggttcatttaaagataaaaac
accattgttgttaaaaagagcgatggtactactaccgagatcaccgctaaaaatgtgatc
attgctacaggttcaaaaccatcggcactgccatttttgcctatcgataaaaaacgtgtt
atcacttcaaccgaagctttaagcctgagcgaagtgcctaaacacctggtattaattggt
ggtggcgttattggtttggagttaggttcggtttatgcacgtttaggtgccaaggtatct
gtaattgaatttatggacggcattatcccaactatggataaaggcttaggtcgtgagtta
cagaaagtattgaccaaactgggtatggaattttacctgggccacaaagttaccggcgcc
acggtaaaaggaaaagaagtaactgtgagctgcgatacaccaaaaggcgaaaagctggaa
cttaaaggtgattactgcctggtagctgttggccgtattgcttacaccgatggtttaggt
ttggaaaatatcggcatcactgttgaagagcgtggccgtaaaattacggttgacgagcac
ctggaaaccaaagttaaaggtgtttatgctattggcgacgtgataaaaggtgcgatgctt
gctcacaaggcagaagacgaaggtacgctggttgccgagatcattgccggccaaaaacca
catattgattataacctgatcccgggtgtagtttatacctggccggaagttgccgcagtt
ggtcaaacagaagagcaattaaaagcagccggtgttaaatacaaaacaggttcgttccca
ttcaaagcaagcggtcgtgcccgtgcaagcggtgacctggacggctttgtaaaagtatta
gcagatgcgacaaccgacgaaattttaggtgtacacatgattggtccgcgtgctgccgat
atgatagccgaggctgttgtagctatggagtaccgtgcaagtgccgaagatatttcacgc
atgagccatgcccacccaacttacaccgaagctatgcgtgaagcgtgtttagctgctact
gaaaacagagcgatacatatttaa

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