KEGG   Mauremys reevesii (Reeves's turtle): 120369627
Entry
120369627         CDS       T07797                                 
Symbol
PCDH12
Name
(RefSeq) protocadherin-12 isoform X1
  KO
K16499  protocadherin delta 2
Organism
mrv  Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:mrv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mrv04515]
    120369627 (PCDH12)
Cell adhesion molecules [BR:mrv04515]
 Cadherins
  Protocadherins
   120369627 (PCDH12)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th DUF1980
Other DBs
NCBI-GeneID: 120369627
NCBI-ProteinID: XP_039339046
LinkDB
Position
LG8:complement(39852304..39900380)
AA seq 1150 aa
MLLLSHFLLQFLVLCWHFFLCIDCQEVSPFAMQYKVLEEVPSGTVIGKLSEDFGWEERSE
PVETFQQLHFPKELPVRVGSGDGLLSTSGRLDRERLCRHNDPCLFSFDVLAAIHLALIHV
EIQVLDINDHAPQFPKPELELEISESASLRTRIPLDRALDPDAGSNALCSYSLSPSDHFA
LDVISGSDGTKHAELVVVKEVDRELHSCFDLVLTAFDHGESPKSGTTLLRVIVLDSNDNS
PMFAESSLTVEIWEDALPGTILINLTATDPDQGPNGEIEYSLSKHASLEVLNMFSIEAKT
GSVVLRRPLDYEENHTYEVDVQARDLGANPIPAHCKILIKVLDVNDNAPDVHITWAAQVP
VLSEALPKDSFVALVTVSDPDSGNNGQVHCYLSQGLEHFKLKRTNRYTYMLLTNAILDRE
RWAEYNLMLMVQDNGNRSLAVRKHLTICISDVNDNPPLFERITYDVTIAENNVPPSYLIT
VKAHDADLDFNGKVSYSIQDFFVSDLVSIDSKTGEIFALRAFDYEQMTSLEFLVTAEDGG
HPKLVSNVSVRVSLLDRNDNSPVIVQPVLVGGKARIIVLVNAQTGCLWLSLGNDSPQGTA
ITTMTPTLSSNVSLLFTIAARDADSGMNGALQYDILSGNDTSLFLIDSLSGQVFINSSNA
SSLIGSEWEMEVLVRDQGNSPLHAKALVQLSFRNHLDQLTNSAQEAQMLNPSMVTVICLA
VLLGTFLLILALIVSICKREKKDNMAYNCREAEHAHRHQQLKKPHKHIQKTDIYLVPVLR
NRQAVQSETEQVLSCEEALLKESAWDDPLQTSFHLTPTLYRTLRNQKGPAEQKDAFNLPA
IQCRPFHPHRLRNASKESSSLQDAQTHSKSLENPQLELLGDQNCDLSLPTIHPSDMTLKR
QRIAEPDVRPREAHPHQHLLRSLVRLSMVALAEQDPMGELAMESPPVQQISQLLSLLHQG
QFQPKPNHRGNKYTAKNGSRSAGLDADCFTIKDSGQGESEADDGDSENGLNLSIDQLVGE
ELESLLEPHAGLALERLTADPAWMARLSLSLTSSYKDNVFSPASLHSSQDQEDAGQDKPR
TFETFGKVTGSDPNAARTRLASTFLSEMSTLFEMILSQKAQAHSATASGFLQQLSAHSKP
FGMDGDAPAV
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgcttttattgtcacactttctgcttcaattcttggtgttgtgctggcactttttcctt
tgtatcgattgccaggaggtgtccccctttgctatgcaatacaaagtgttagaagaagtg
ccaagtggaacggtgatagggaaattatctgaggattttggctgggaagagagaagtgaa
ccagtagagaccttccagcagctgcatttccccaaggagctccctgtccgcgttgggtct
ggagatggtttgcttagcacatcagggcggttggacagagagcggttatgcaggcacaat
gatccatgcttgttctcttttgatgttctggctgccatacacttggctttaatccacgtg
gagattcaggtcttggacatcaatgatcatgcaccccaatttcctaaacctgagctggaa
ctagaaatatcagagagtgcatctttacgaacacggatcccactggacagagctcttgac
ccagatgctggctccaatgccctctgctcttactcattatcacccagtgaccactttgct
ttggatgtaatttctggatctgatgggactaaacatgcagaacttgtagttgttaaagaa
gtggacagagagctccactcttgttttgatctagtattgactgcctttgatcatggagaa
tcaccaaaatcaggcacaaccttacttagggtaattgttttagactccaatgataacagc
cctatgtttgcagagagttctttgacagtggaaatctgggaagatgctttgcctgggaca
attcttataaaccttacagccactgaccctgatcaaggtcccaatggggagatagaatac
tcactcagtaaacatgcttcactggaggtgttgaacatgttcagcattgaagccaagaca
ggcagtgtagttctgagacgcccactggactatgaagaaaaccatacctatgaagtagat
gtgcaagccagggatcttggagccaaccctatcccagcacactgcaagatcctcatcaag
gtcctggatgtcaacgacaatgccccagatgtgcacatcacttgggctgcccaggtgcca
gtgctatctgaagctcttcctaaggacagctttgttgctctggtgacagtaagtgatccc
gattctggaaacaatggtcaggtgcattgttatcttagtcaaggacttgagcatttcaaa
ttgaaaagaaccaacagatacacttatatgctgttgaccaatgccattttggacagggag
aggtgggcagaatataacctgatgttaatggtccaggacaatgggaatcgctccttagct
gtgaggaaacacctcactatatgcatcagcgatgtcaatgacaacccaccattgtttgaa
agaattacatatgatgtcaccattgctgagaacaatgtgcctccatcctacctgattact
gtcaaggctcacgatgctgacttagattttaatggaaaggtcagttatagcatccaggat
ttctttgtttcagacttggtctctattgattcaaaaactggtgaaatctttgcgctcaga
gcttttgattatgaacaaatgacaagtctggaattcctggtgacagcagaagatgggggt
caccccaaacttgtgtcaaatgtttctgttagggttagtctgcttgataggaatgataat
tcccctgtgattgtgcagccagtgctggtgggaggcaaagcaaggatcattgttctagtc
aatgcacagaccggatgcctgtggctatctttagggaacgacagcccccaaggtacagca
ataaccaccatgacaccaacactgagttcaaacgtttccctgctattcaccatagctgcc
agggatgcagattctggcatgaatggggccctccagtatgatattctgagtgggaatgat
accagtttgtttctcattgattcactgtcagggcaggtgtttatcaacagcagcaatgcc
agcagcctcattggcagtgaatgggaaatggaggtgttggtaagggatcaagggaactca
ccgctgcatgcaaaagcccttgtgcagttaagtttcagaaatcatcttgaccagctgaca
aactcagcccaggaggctcagatgctgaacccatccatggtgactgttatctgcctagct
gtgctattaggcacttttcttcttattttggctttaatcgtgtctatatgcaaaagagag
aagaaagataacatggcctacaactgcagggaagcagaacatgcccacagacatcagcag
ctcaagaagccccacaaacacattcagaaaacagacatatatttagtccctgtactcaga
aacaggcaagctgtgcagagtgagactgagcaagttctgtcctgtgaagaagctttgctg
aaggaaagtgcctgggatgacccactgcagacttcatttcatttaaccccaacactgtac
aggacccttagaaatcagaaaggtccagctgaacagaaagatgccttcaatctccctgca
atacagtgcagacccttccacccacacaggctaagaaatgcatcaaaagagagctcaagc
cttcaagatgcacaaacccattccaaaagcttagagaacccacagctggagcttttggga
gatcagaattgtgacctctcactgccaactattcatccctcagacatgactctgaagaga
cagagaattgctgagccagatgtgaggcccagggaagcccatccccaccagcacctcctg
agaagcctagtgaggctgtccatggtggcacttgcagaacaggaccccatgggagaactt
gctatggagtcacctcctgttcagcaaatctctcagctgctgtctctgctgcaccaaggc
cagttccagcccaaaccaaatcacaggggaaacaaatacacagccaagaatggcagcagg
agtgcagggctggatgctgattgcttcactataaaggacagtggtcaaggagagagtgag
gcagatgacggggattcagaaaatggactcaatctttccatagaccagctggtgggagaa
gaactcgagagccttctagagccccatgcagggctggccctggagaggttgacggcagac
cctgcatggatggctcggctctccctgtccctcaccagcagctacaaggacaatgttttc
tcccctgcttctctgcactcttctcaggaccaggaagatgcagggcaggataaaccaaga
acctttgagacatttggcaaagttactggatctgacccaaatgcagccaggacgagactg
gccagcactttcctctccgagatgagcaccctatttgaaatgatcttatcccagaaagca
caggcccattcagcaacggcctcaggattcctgcagcagctctctgcgcatagcaagccc
tttgggatggacggcgatgctcctgctgtgtag

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