Mauremys reevesii (Reeves's turtle): 120370210
Help
Entry
120370210 CDS
T07797
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrv03000
]
120370210 (RC3H1)
04121 Ubiquitin system [BR:
mrv04121
]
120370210 (RC3H1)
Transcription factors [BR:
mrv03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
120370210 (RC3H1)
Ubiquitin system [BR:
mrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120370210 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
120370210
NCBI-ProteinID:
XP_039340504
LinkDB
All DBs
Position
LG8:complement(48585769..48690429)
Genome browser
AA seq
1135 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IDLLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILSDE
GAVDLPSRKSSALSNGIVSTVSTGTQLISRGTDSGYDSALKPGKIDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPPRGPTDLLTTSKQLQIVPRGSQLYPAQQGNMFYQEPRGSAP
PFEPSPYPQGVYYPTPSSQCVSRFVRPPPSAPEPGGPYLDHYPPYLQDRLVNSQYSTQPQ
QYPPMGQPMYPHYESRRVYPSAQPYQREEIVRGSPVPIDIPRGAAPPYVPESRDRYQQVE
GYYPVGPHLNPIRPYHRETYNPLPPPSQTHPSLDELHRRRKEIMAQLEERKVISPPPFAP
SPTLTHPFHPEEVFVFVQYSDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDV
VAAGSVEMANIDSKGMRDQRLDLQRRAAEAGDDDLIPFGDRPTVSRFGAISRTSKTMYQS
SGPMQAIAVQGASTKSINISDYSPYGTHGSWGASAYSPHQNIPSQGRFSDRERLSMSDVA
SHGKPLPSAEREQQLRLELQQLNHQISQQTQLRGLEAVNNRLLLQREATTLAGQPQPPPH
KWPAMISSEQLSMELHQVEREIGKRTRELSMETQSSLDMKSNLGTNKQTENGQLEPQSKV
PAEKFSDVPNGSVLTQENISLLSNKTTSLNLSEDPEGGGDHQDSQRTGVAPTSSP
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccaatttgcacacaaact
tttgacgaaacgatccggaagcccatcagcttgggctgcggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgccccttcgaccagaccactatcaatacagat
attgatctcctccctgtgaactcagctttgttgcagctagtgggtgctcaggttcctgag
cagcagccaatcactttgtgcagtggagcagaagacaccaaacattatgaggaggccaag
aaatgtgtggaagaactagcgttgtacctcaaaccactcagcagtgcgagaggtgtgggt
ctgaacagtaccactcagagtgtgctaagtcgccccatgcagaggaagcttgtaactcta
gttcactgccagctagtagaggaagaaggacggatcagggccatgcgtgcagcacggtca
ctgggtgaaagaacagtcacagagctcattcttcaacatcaaaatccccagcaactctct
tccaacctctgggctgcagtgagggccaggggctgccagttcctggggccagcaatgcaa
gaggaagcactgaagctggttctgctggctctggaagatggatctgctttgtcacgaaag
gtcttggttctctttgtggtgcagagattggagccacgatttcctcaagcttctaaaacc
agcattgggcatgttgtccagcttctttacagagcctcctgcttcaaggtgactaaacgt
gatgaggactcctccctgatgcagttgaaggaggagttccgtacctatgaagctctgcga
agggaacatgattcccagattgtgcagattgccatggaagcaggtttacgcattgcaccg
gatcagtggtcctcgctgctatatggtgatcagtcccacaaatcccacatgcagtccatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaagaactaaccattgct
ctccagaggactggagacccagccaacttgaaccgacttcgacctcacctagagctcttg
gcaaatattgaccctagtccagatgccccacccccaacatgggaacaactagaaaatgga
ttagttgctgtgaggacagtggtacatggactagttgattacatccagaatcacagcaag
aaaggaacagatcagcagcagcctcctcaacacagcaagtataagacatacatgtgccga
gacatgaagcagagaggagggtgtccccgtggagccagctgcaccttcgcacactcgcag
gaagaattggaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctccttgggccagctaaatgaggtgggcctgccttcagcagctatcctctcggatgaa
ggggcagtggacttgcccagtagaaaatcctctgccttgtcgaatgggattgtgtctacg
gtcagcacagggacgcagcttatctcccgagggaccgactccggctatgattctgctctg
aagccagggaagatcgaccaccttagcagcagtgcccctggatcccctcctgacttgctg
gagtctgtccccaagagctctatttctgccttaccagtgaacccccaccctgtgcccccg
agaggacctacagacctgctcacaacgtccaagcaactccaaattgtaccacgagggtca
cagttgtatcctgctcaacaaggaaatatgttttatcaggaacctagaggatctgcccca
ccatttgagccatcaccttatccacaaggtgtgtactatcctactccatcctcacagtgc
gtgtctcgttttgtccgacctccaccatctgctcctgaacctggtggtccttacttagac
cattacccaccctaccttcaggatcgtctggtgaattcgcagtacagcacacagccacag
cagtatcctcccatgggacaacctatgtacccacattatgagagccggcgtgtgtaccct
tctgcccaaccataccagcgggaagagattgtccgaggaagccctgtgcccattgacatt
ccacgtggagctgcacctccctacgtacctgaatccagagacagataccagcaagtggag
ggttattatcccgtgggtccacatctcaatccgatcagaccataccacagagagacttac
aacccacttccgcctccatctcaaacccatcccagcctggatgagcttcatcgccgaagg
aaggaaatcatggcccagttagaagaaaggaaggtgatctccccacctccctttgcaccg
tcaccaactttgactcaccccttccacccagaggaggtttttgtttttgtacagtactcg
gatgaagacctgaaggtagctgggaaatacaaaggaaatgattatagccagtactctcct
tggtcgtgtgacaccattggctcctacattggaaccaaagatgcaaaacccaaagatgtt
gtggcagcagggagtgtagagatggcgaacatagatagtaaaggcatgcgtgaccagcgg
ttggacttacagagaagggcagcagaagctggggacgatgacctcatcccatttggagac
cggccaactgtgtcaaggtttggggccatctcgcgtacttccaaaacgatgtaccagagt
tctggccccatgcaggccattgcggtacagggagcttccaccaaatctatcaacatttca
gattacagtccatatggaactcatggcagctggggagcttctgcatattcaccccaccaa
aacataccttctcagggacgcttcagtgacagggagagattgtccatgtcagatgtggcc
agtcacgggaaacccttgccgtcagctgagagggagcagcagctcaggctggaactgcag
caactaaatcatcagatcagccagcagacacaattacgaggactggaggctgttaataac
aggctgctgttgcagagggaggcgaccaccctggcgggccagccacagccaccacctcat
aaatggcctgcaatgatctcaagtgaacagctgagtatggaactgcaccaggtggaaagg
gaaatcgggaagagaacccgtgagctgagcatggagacccagtcttcactggacatgaaa
agcaacctgggcaccaataaacagacagaaaatggacaactagaaccacaaagcaaggtt
ccagctgagaagttcagtgatgttccaaatggatcagtcttgacgcaagagaacatcagc
ctcctgtcaaacaagaccacatctctgaacctgtcagaggacccagaggggggaggagac
caccaggactcccagagaacaggagttgcacccacctcttctccatga
DBGET
integrated database retrieval system
