Mauremys reevesii (Reeves's turtle): 120370500
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Entry
120370500 CDS
T07797
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like isoform X1
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrv04121
]
120370500
Enzymes [BR:
mrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120370500
Ubiquitin system [BR:
mrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120370500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-RING_5
Crescentin
ApoLp-III
Fuseless
Motif
Other DBs
NCBI-GeneID:
120370500
NCBI-ProteinID:
XP_039341254
LinkDB
All DBs
Position
LG8:108796527..108806750
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AA seq
683 aa
AA seq
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MALTSMSLQELIKEDFLTCKICYDLYTVPKILPCLHSYCQHCLEPLVRDGALLCPECRLQ
TDVPGGASSLKTNFFINSLLELFQIKHNRDLACTVCSDAQKILTATARCLDCKDFLCQSC
TQGHCCSRLTLHHKVVKLEEFLAGEYDAEMRLLQELCCQDHQQEALRFFCDTCSAPICRD
CRMLDHFQHKVVSMANAVQRERPSVEQLIDSLAGTITCISEQEKAVEETVDKLKISGENI
KERITRYVDDFIDYLLAQKEAILGELSAFLTQQMESCRLVKEELQNQRDKAISTKEFSQR
VLYVGKDYEILHLEGMIRNRIQELQTYIPRKLESQIPELAIAWDQPVMLSEAALFSLVFP
GEHPKGDMETVFEPDSEASASPSEESEDDPVLPVDSEEDSCPNSEESAPDTPNKNSSCCS
RRSKRPKRVCTFEVDQCCSQVKPNITGIAVLPHAGGILLLDQENDEIKQYSAGGHFQQSI
PLPDSDSVFCGISVCGDVLACSSDSFLFFLTLEGKFLHKLLLRGSESSYAITSYEDSYIA
VSEGTLCSISLYSPSGHCVGRVTPTDYHGGKFLFIAVNDWEEFIVSDFIKKQIVIIEKSG
LILNVLKTSHSLLTKPFSVCVDTSSNIFVVDQLKVIKFSPDGETGEVVLSNQNRQKRPRV
LAVDDGGRLVLVQEDGYVHIYCF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctctaacctctatgtccttacaagaattaatcaaggaggattttctgacctgtaaa
atctgctatgatctctacacagtgccaaagatccttccgtgtctgcacagttactgccag
cattgcctggaaccactagtgagggacggagccctcctgtgtcctgagtgccggctgcaa
acagatgtcccaggaggagcctcatctctgaaaaccaacttcttcatcaacagcctactg
gagttgttccagattaaacacaacagggacttggcctgcacagtctgctcagatgcccag
aagatcttgactgcaactgcccgttgcctagactgcaaggatttcttgtgccagtcatgc
actcagggccattgctgctcccgtctcactcttcatcacaaggtggtgaagcttgaggag
tttctagctggggagtatgatgctgagatgaggctgcttcaggagctgtgctgccaggac
caccagcaggaagctctgcgattcttctgtgacacctgcagtgctcccatctgcagggac
tgccgcatgctagaccatttccagcataaggtggtctctatggcaaatgctgtgcagcgg
gaaaggccttctgttgagcagctaattgacagcctggcaggaacaataacatgcatctct
gagcaggaaaaagctgtggaggagacggtagataagttgaaaatatcaggagagaacata
aaggagaggatcaccagatatgtggatgactttattgactatctcctggcccagaaagaa
gccattctgggcgagctgtctgcttttctaactcagcaaatggaaagttgtcgcctggtg
aaagaggagctccagaaccaaagagataaagcaatcagtaccaaggagttctctcaaagg
gtcctctatgtgggaaaggactatgagatcttacacctggagggcatgataaggaatcgg
attcaggagctccagacatatatcccacggaaactagagagccaaatccctgaattggcc
atagcctgggatcagccagtaatgctgtctgaggcagcactcttcagtctagtatttcct
ggggaacatcctaaaggagacatggaaactgtttttgagccagatagtgaggcatctgct
tcccccagtgaggagtctgaggatgacccagtcttgcctgtggactcggaagaagactcg
tgtccaaactctgaagagagtgctcctgacactcccaacaagaactcctcttgttgcagc
agacgcagtaaaaggcctaagcgtgtctgcactttcgaggtagaccagtgctgctcccaa
gtaaagcccaatatcacagggattgctgttctgcctcatgctggtggcattctcctgttg
gatcaggagaatgatgagataaagcagtacagcgctggtgggcactttcagcaatcaata
cccctgccagactcagacagtgtcttctgtggcatttcggtctgtggagatgtcctagct
tgctcttcagattccttcctcttcttcctgacccttgagggaaagtttctgcacaagttg
ctgctaaggggatccgagtcttcctatgctatcacctcctatgaggactcctatattgct
gtgagtgagggcactctctgctccatctccctttacagcccttcaggacactgcgtgggc
agggtgacacccacagattaccatggggggaagttccttttcattgccgtcaatgactgg
gaggaattcattgtctcagacttcatcaagaagcagattgtcatcattgagaagtctggg
ctgatcctcaacgtgctgaagacctcacactcgctgctgacaaagccgtttagtgtatgt
gtggacacgtccagtaacatttttgtggtcgatcagttgaaggtgattaaattttcccca
gatggtgagacgggggaggtagtgttgagcaaccaaaatcggcagaagagaccccgtgtc
cttgctgtggatgatggcgggcgccttgtcctggtgcaagaggatggttacgtccacatt
tactgcttctag
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