Mauremys reevesii (Reeves's turtle): 120371610
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Entry
120371610 CDS
T07797
Name
(RefSeq) collagen alpha-3(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04510
Focal adhesion
mrv04512
ECM-receptor interaction
mrv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120371610
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120371610
09142 Cell motility
04820 Cytoskeleton in muscle cells
120371610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrv04147
]
120371610
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120371610
Exosome [BR:
mrv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120371610
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120371610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120371610
NCBI-ProteinID:
XP_039343453
LinkDB
All DBs
Position
LG9:complement(33831304..33942593)
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AA seq
1670 aa
AA seq
DB search
MTRRGCLRLLLFALLGSLRRPDGFAAAKSCVCKGKSHCYCDGMKGNKGEKGFPGAQGVPG
QTGFCGPEGPPGPQGPTGFPGRIGLVGPKGERGMLGLPGFSGLPGLPGEPGNIGPPGGPG
IPGCNGPKGEQGFPGPPGPGGVPGKPGIDGLKGDKGCPASGYDPGYDGRGDPGLPGISGR
QGEPGPRGVQGLVGPQGPPGSSGVSGRMGLPGRKGVMGIKIIGTKGIQGEPGSTGPPGLP
GTVIVTLSGPDNMKGLKGDKGERGSRGLPGPVGSLGFPGDFQSEKGDPGEPGLQGKPGKD
GTPGPHGFLGEKGERGYPGSPGIAGTKGRKGDIGPLGFPGPTKYYDEVAGEKGDEGYPGP
PGLKGQPGIPGPRGPLGVTGRPGVSRPGVNGPQGYPGLKGIKGERGQPGMNTVGSPGLHG
FPGRPGSVGSPGPPGQPGKVTFETHPPGVPGNPGCVGPPGPPGDSGVKGEEASPCNQCSY
IPGGPGLPGAPGQDGQEGVTGRQGISGPKGSRGSPGAQGPSGPQGLPGFPGDQGLKGPNG
EPGYVYPEGQKGNRGDPGIRGNPGRKGSDGLHKKHGSKGSKGSKGERGLDGSKGDRGLSG
LPGNPGLPGEMGLTGPPGYGPQGMTGPKGAKGISGLPGLPGAIGPKGEPSAVNPIPGPPG
PRGPEGLPGPPGAMGNVGSRGQRGDLGLPGSDGAPGFSGTGFPGDSGPKGDKGLQGSKGS
PGLPGKAGEPGSPGQPGYPGEKGDPGLIIPGQQGGLGSPGEGGFPGVKGDRGFPGLPGFP
GHNGSDGPRGEPGCPGAPGEKGLPGKLGDCLIGPPGLPGACGLTGQQGERGELGSKGDPS
IPGLGVPGFPGQFGLPGLPGCPGDTGSPGLKGQPGRPGIPGAPGQRGERGIMGNLGIPGP
PGVFGHPGIPGNRGSPGLPGLKGRKGFLGAKGEPGDKGFPGPSETTGNPGDKGEPGSKGF
PGRIGLKGERGDKGIQGSAGLDGTSGVSGLPGPKGFVGLQGIPGRQGLPGPPGDRGDMGV
PGSKGERGSQGLPGPSGAQGPPGLLGFPGDKGEPASSASGPPGKPGPKGDPGPPGEMGRK
GERGSPGQPGLVGEPGLAGNRGDCGKPGAPGPSKCAGDTGAKGCKGVAGPRGTEGPPGAI
GAPGANGAVGERGNQGRDGIPGFPGEKGERGAPGWQIKGLQGISGPKGIKGDVGIPGCPG
PEGIKGLMGDPGPIGPPGLNGKPGFPGAPGIMIPGQKGNKGLPGVDGRQGIPGSPGSSGT
PAYSIKGNKGVRGIDGIPGPPGLVGNIGPQGLTGVEGTPGNVGPRGEPGFPGLPGVTGEK
GNRGPPGPMGAAGPIGPKGPPGQPGAPSKATYIPGNQGPAGSPGSPGLPGDPGPQGPPGL
HGPQGVKGLPGHCGNPGILGPVGPKGDKGFQGQRGPPGLIGFPGVRGSPGSPGISIPGPT
RRGFIFTRHSQSTKIPSCPSGTAQIYSGYSLLFVQGNEQAHGQDLGTVGSCLQRFTTMPF
LFCNTNDVCSFASRNDYSYWLSTAAPMPEDMAPISGRALQPYISRCIVCEGPAVVIAVHS
QTTAVPSCPQGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTC
NYYTNSYSFWLASLDPRRMFRKPLPQILKAGELENIISRCQVCMKRDRNS
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccggggctgcctgcggctgctgctcttcgccctgctcggcagcctgcgccgg
cccgacggcttcgccgccgccaagagttgtgtctgcaaaggtaaaagccactgctactgt
gatggaatgaaaggtaataagggtgaaaaaggatttcctggtgctcaaggtgtacctggc
cagacaggtttctgtggccctgagggacctccagggccacaaggacccacgggttttcca
gggcggataggtttagttggacccaaaggtgaaaggggaatgctaggattacctggtttt
tcaggtctcccaggtcttccaggtgaaccaggaaacattggtcctcctggaggtccagga
attccaggatgcaatggcccaaagggtgaacaaggatttccagggcctccaggcccagga
ggtgttccaggcaaaccaggtattgatggcctcaaaggagataaggggtgccctgcaagt
ggatatgacccaggatatgatggaagaggtgaccctggattaccaggaatatctggacgc
cagggtgaaccaggtcctcgaggagtccaagggctagttggaccacaaggccctccggga
tcttcaggtgtttcagggagaatgggacttccaggacgtaagggtgtcatggggattaag
atcataggaaccaaaggaatacagggtgaacctggatcaacaggaccccctgggcttcca
ggaacagttattgtgacattaagcggaccagataatatgaagggcttgaaaggagataaa
ggagagagaggatcaaggggtctcccaggaccagttgggtcattgggttttcctggagat
tttcaaagtgaaaaaggtgacccaggagagcctggcctgcagggtaaacctggaaaagat
ggtacccccggtccacatggctttctgggagagaagggtgaacgcggctacccaggatca
cctggaatagcaggcactaaggggaggaaaggagacattggcccactaggatttcctggt
cccacaaagtattatgatgaggtggctggtgaaaaaggagatgaaggatatccaggaccc
ccaggactgaaaggtcaacctggcatacctgggccaagaggtcccctaggtgtgacagga
agaccaggtgtatcgagacctggcgtaaatggcccacaaggatatccaggactgaaagga
attaagggagagagaggacagcctggcatgaatactgtggggtctccaggacttcatggg
tttccaggcagacctggctctgtaggatcaccaggtcctccaggacagccaggtaaagta
acgtttgaaacgcacccaccaggagttccaggaaaccccggatgtgtgggacctccagga
cctccaggagatagtggagtgaaaggtgaagaagcaagtccttgtaatcaatgcagttat
ataccaggaggacctggacttcctggtgctcctgggcaagatggtcaagaaggagttact
ggtagacaaggaataagtggtcccaaaggatctcgaggttctccaggggcacaagggcct
tcaggtcctcaaggacttccaggttttccaggagatcaaggactgaaagggccaaatggt
gaaccaggatatgtgtatccagaagggcaaaaaggaaacagaggagatccagggatcaga
ggaaatccagggcggaaaggttcagatggattgcacaaaaaacatggttcaaaaggctca
aaaggttctaaaggcgaacggggactggatggttcgaaaggggacagagggttatcagga
ttgcctggtaacccaggtcttcctggagaaatggggctcactggaccaccaggatatgga
ccacaaggaatgacaggtcccaaaggtgctaagggaatatctggattgcctggattgcct
ggagcaattggtccaaaaggagaacctagtgcagtaaatccaatacctggaccaccagga
cctcgggggccagagggtttaccaggacccccaggagcaatgggtaatgttggatctaga
ggacaacgtggtgatttaggattacctgggtctgatggtgctccaggattttcagggact
ggatttcctggagattctggtccaaaaggggataaaggtcttcaagggtctaaaggatca
ccaggtttgccaggaaaggcaggagaaccaggctcgcctggacagcctggatacccagga
gaaaagggagaccctggattaattattcctggccaacagggtggcttaggttccccagga
gaaggcggctttccaggggtaaaaggtgacagaggatttccaggtctaccaggattccca
ggacataacggttctgatgggccaagaggagaacctggctgtcccggagctcccggagaa
aagggacttccagggaagcttggtgattgtcttattggtccaccaggtctcccaggtgca
tgtggattaacaggccaacaaggagaaagaggtgaattaggatcaaaaggagaccccagt
attccaggcttgggtgtcccaggattccctggacaatttgggctgcctggattgccaggt
tgcccaggagacacaggatcacctggtctcaagggtcagcctggcagaccaggaatacca
ggtgcaccaggccaaagaggagaacgaggtataatgggcaatttaggaattcctggacct
cctggtgtctttggacacccaggcattccaggaaacagaggttctcctggccttccagga
ctgaagggaagaaaagggtttttaggggcaaagggtgaaccaggtgataaaggatttcct
ggaccatcagagaccacagggaatcctggggataaaggagaaccaggatcaaaaggattt
ccaggaagaataggtctgaaaggagaaagaggagataaaggtatacaaggatcagcaggg
cttgatgggacatcaggagtatcaggtctgccaggtcccaaaggatttgtaggtctgcaa
ggaattcctggaagacaaggattaccaggacctccaggagacagaggtgatatgggagtg
ccaggttctaaaggggagagaggatctcaaggtttaccaggaccatctggtgcacaaggc
cctccaggccttcttggttttccaggtgataaaggagaaccagctagttcagcatctggg
cctccaggaaaaccaggaccaaagggtgatccaggtcccccaggagaaatgggaagaaaa
ggggaaagaggatcaccaggtcagccaggacttgtaggagaacctggactagctggaaac
aggggggattgtggaaaaccaggcgctccagggccatctaaatgtgctggagatactggc
gctaaaggctgcaagggggtggcaggaccgagaggcactgaaggccctccaggtgcaata
ggagcccctggagccaacggagctgttggggaaagggggaatcaaggacgggatggtatt
cctggcttcccaggagaaaagggagaacgaggtgcaccagggtggcagattaaaggcctg
caaggtatttctggtcctaaaggaatcaaaggtgacgtggggattcctggttgtccagga
ccagaaggtattaaaggtctaatgggggatccaggaccaattggacctcctggattgaat
ggaaagccaggattcccaggtgcaccaggcataatgattcccggccagaaaggaaataaa
ggtcttcccggagtggatggaagacagggtattcctggtagtccaggatcttctggaacc
cctgcgtacagcataaaaggaaacaaaggtgttagaggtatagatggcataccaggacca
ccaggattggtaggcaatattggtcctcaaggtttaacaggagttgaaggcaccccaggc
aatgtaggccctagaggtgaacctggctttccaggacttccaggtgtaacaggagaaaag
ggtaatcgaggaccccctggaccaatgggtgcagctggacctatcggaccaaagggcccc
cctggtcagcctggagcacctagtaaagcaacatatatcccaggaaaccaaggacctgct
ggatcacctggaagcccaggactaccaggagatccaggacctcaagggccaccaggatta
catggacctcaaggtgtaaaaggcctaccaggccattgtggaaatccaggcatacttgga
ccagttggtccaaaaggagacaaaggatttcaaggacaaagaggacctcctgggcttatt
ggctttccaggagtacggggctcacctggttctccgggtatttccatacctggtccaaca
aggagaggcttcatctttacccggcacagccagtcaacaaagattccttcatgcccatct
gggacagctcagatctacagtggttattctcttctctttgtacaaggaaatgagcaagca
catggccaagaccttgggacagttggtagctgcctgcagcgatttaccaccatgccattt
ttattctgtaacaccaatgacgtttgcagttttgcttctcgcaatgactattcatactgg
ctgtcaactgcagcaccaatgccagaagacatggcaccaatctctggcagagccttacag
ccctatattagcagatgtattgtttgtgaaggaccagcagtggtaatagcagttcacagc
caaacaactgcagttccttcatgtcctcaaggctggatatctctctggaagggtttttcc
tttgttatgtacacaagtgccggttcagaagcctctggccaagcattggcatcacctgga
tcctgcttggaagaattccgtgccattccattcatagaatgtcatggtagagggacatgc
aactactacacaaattcctacagcttctggctggcttcactagatccaagaagaatgttc
aggaagcctttaccacagattttaaaagcaggggaattggaaaacatcatcagccgctgt
caggtctgcatgaagagagacagaaattcttga
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