Mauremys reevesii (Reeves's turtle): 120371610
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Entry
120371610 CDS
T07797
Name
(RefSeq) collagen alpha-3(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04382
Cornified envelope formation
mrv04510
Focal adhesion
mrv04512
ECM-receptor interaction
mrv04518
Integrin signaling
mrv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120371610
04518 Integrin signaling
120371610
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120371610
09142 Cell motility
04820 Cytoskeleton in muscle cells
120371610
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120371610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrv04147
]
120371610
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120371610
Exosome [BR:
mrv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120371610
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120371610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120371610
NCBI-ProteinID:
XP_039343453
LinkDB
All DBs
Position
LG9
Genome browser
AA seq
1670 aa
AA seq
DB search
MTRRGCLRLLLFALLGSLRRPDGFAAAKSCVCKGKSHCYCDGMKGNKGEKGFPGAQGVPG
QTGFCGPEGPPGPQGPTGFPGRIGLVGPKGERGMLGLPGFSGLPGLPGEPGNIGPPGGPG
IPGCNGPKGEQGFPGPPGPGGVPGKPGIDGLKGDKGCPASGYDPGYDGRGDPGLPGISGR
QGEPGPRGVQGLVGPQGPPGSSGVSGRMGLPGRKGVMGIKIIGTKGIQGEPGSTGPPGLP
GTVIVTLSGPDNMKGLKGDKGERGSRGLPGPVGSLGFPGDFQSEKGDPGEPGLQGKPGKD
GTPGPHGFLGEKGERGYPGSPGIAGTKGRKGDIGPLGFPGPTKYYDEVAGEKGDEGYPGP
PGLKGQPGIPGPRGPLGVTGRPGVSRPGVNGPQGYPGLKGIKGERGQPGMNTVGSPGLHG
FPGRPGSVGSPGPPGQPGKVTFETHPPGVPGNPGCVGPPGPPGDSGVKGEEASPCNQCSY
IPGGPGLPGAPGQDGQEGVTGRQGISGPKGSRGSPGAQGPSGPQGLPGFPGDQGLKGPNG
EPGYVYPEGQKGNRGDPGIRGNPGRKGSDGLHKKHGSKGSKGSKGERGLDGSKGDRGLSG
LPGNPGLPGEMGLTGPPGYGPQGMTGPKGAKGISGLPGLPGAIGPKGEPSAVNPIPGPPG
PRGPEGLPGPPGAMGNVGSRGQRGDLGLPGSDGAPGFSGTGFPGDSGPKGDKGLQGSKGS
PGLPGKAGEPGSPGQPGYPGEKGDPGLIIPGQQGGLGSPGEGGFPGVKGDRGFPGLPGFP
GHNGSDGPRGEPGCPGAPGEKGLPGKLGDCLIGPPGLPGACGLTGQQGERGELGSKGDPS
IPGLGVPGFPGQFGLPGLPGCPGDTGSPGLKGQPGRPGIPGAPGQRGERGIMGNLGIPGP
PGVFGHPGIPGNRGSPGLPGLKGRKGFLGAKGEPGDKGFPGPSETTGNPGDKGEPGSKGF
PGRIGLKGERGDKGIQGSAGLDGTSGVSGLPGPKGFVGLQGIPGRQGLPGPPGDRGDMGV
PGSKGERGSQGLPGPSGAQGPPGLLGFPGDKGEPASSASGPPGKPGPKGDPGPPGEMGRK
GERGSPGQPGLVGEPGLAGNRGDCGKPGAPGPSKCAGDTGAKGCKGVAGPRGTEGPPGAI
GAPGANGAVGERGNQGRDGIPGFPGEKGERGAPGWQIKGLQGISGPKGIKGDVGIPGCPG
PEGIKGLMGDPGPIGPPGLNGKPGFPGAPGIMIPGQKGNKGLPGVDGRQGIPGSPGSSGT
PAYSIKGNKGVRGIDGIPGPPGLVGNIGPQGLTGVEGTPGNVGPRGEPGFPGLPGVTGEK
GNRGPPGPMGAAGPIGPKGPPGQPGAPSKATYIPGNQGPAGSPGSPGLPGDPGPQGPPGL
HGPQGVKGLPGHCGNPGILGPVGPKGDKGFQGQRGPPGLIGFPGVRGSPGSPGISIPGPT
RRGFIFTRHSQSTKIPSCPSGTAQIYSGYSLLFVQGNEQAHGQDLGTVGSCLQRFTTMPF
LFCNTNDVCSFASRNDYSYWLSTAAPMPEDMAPISGRALQPYISRCIVCEGPAVVIAVHS
QTTAVPSCPQGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTC
NYYTNSYSFWLASLDPRRMFRKPLPQILKAGELENIISRCQVCMKRDRNS
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccggggctgcctgcggctgctgctcttcgccctgctcggcagcctgcgccgg
cccgacggcttcgccgccgccaagagttgtgtctgcaaaggtaaaagccactgctactgt
gatggaatgaaaggtaataagggtgaaaaaggatttcctggtgctcaaggtgtacctggc
cagacaggtttctgtggccctgagggacctccagggccacaaggacccacgggttttcca
gggcggataggtttagttggacccaaaggtgaaaggggaatgctaggattacctggtttt
tcaggtctcccaggtcttccaggtgaaccaggaaacattggtcctcctggaggtccagga
attccaggatgcaatggcccaaagggtgaacaaggatttccagggcctccaggcccagga
ggtgttccaggcaaaccaggtattgatggcctcaaaggagataaggggtgccctgcaagt
ggatatgacccaggatatgatggaagaggtgaccctggattaccaggaatatctggacgc
cagggtgaaccaggtcctcgaggagtccaagggctagttggaccacaaggccctccggga
tcttcaggtgtttcagggagaatgggacttccaggacgtaagggtgtcatggggattaag
atcataggaaccaaaggaatacagggtgaacctggatcaacaggaccccctgggcttcca
ggaacagttattgtgacattaagcggaccagataatatgaagggcttgaaaggagataaa
ggagagagaggatcaaggggtctcccaggaccagttgggtcattgggttttcctggagat
tttcaaagtgaaaaaggtgacccaggagagcctggcctgcagggtaaacctggaaaagat
ggtacccccggtccacatggctttctgggagagaagggtgaacgcggctacccaggatca
cctggaatagcaggcactaaggggaggaaaggagacattggcccactaggatttcctggt
cccacaaagtattatgatgaggtggctggtgaaaaaggagatgaaggatatccaggaccc
ccaggactgaaaggtcaacctggcatacctgggccaagaggtcccctaggtgtgacagga
agaccaggtgtatcgagacctggcgtaaatggcccacaaggatatccaggactgaaagga
attaagggagagagaggacagcctggcatgaatactgtggggtctccaggacttcatggg
tttccaggcagacctggctctgtaggatcaccaggtcctccaggacagccaggtaaagta
acgtttgaaacgcacccaccaggagttccaggaaaccccggatgtgtgggacctccagga
cctccaggagatagtggagtgaaaggtgaagaagcaagtccttgtaatcaatgcagttat
ataccaggaggacctggacttcctggtgctcctgggcaagatggtcaagaaggagttact
ggtagacaaggaataagtggtcccaaaggatctcgaggttctccaggggcacaagggcct
tcaggtcctcaaggacttccaggttttccaggagatcaaggactgaaagggccaaatggt
gaaccaggatatgtgtatccagaagggcaaaaaggaaacagaggagatccagggatcaga
ggaaatccagggcggaaaggttcagatggattgcacaaaaaacatggttcaaaaggctca
aaaggttctaaaggcgaacggggactggatggttcgaaaggggacagagggttatcagga
ttgcctggtaacccaggtcttcctggagaaatggggctcactggaccaccaggatatgga
ccacaaggaatgacaggtcccaaaggtgctaagggaatatctggattgcctggattgcct
ggagcaattggtccaaaaggagaacctagtgcagtaaatccaatacctggaccaccagga
cctcgggggccagagggtttaccaggacccccaggagcaatgggtaatgttggatctaga
ggacaacgtggtgatttaggattacctgggtctgatggtgctccaggattttcagggact
ggatttcctggagattctggtccaaaaggggataaaggtcttcaagggtctaaaggatca
ccaggtttgccaggaaaggcaggagaaccaggctcgcctggacagcctggatacccagga
gaaaagggagaccctggattaattattcctggccaacagggtggcttaggttccccagga
gaaggcggctttccaggggtaaaaggtgacagaggatttccaggtctaccaggattccca
ggacataacggttctgatgggccaagaggagaacctggctgtcccggagctcccggagaa
aagggacttccagggaagcttggtgattgtcttattggtccaccaggtctcccaggtgca
tgtggattaacaggccaacaaggagaaagaggtgaattaggatcaaaaggagaccccagt
attccaggcttgggtgtcccaggattccctggacaatttgggctgcctggattgccaggt
tgcccaggagacacaggatcacctggtctcaagggtcagcctggcagaccaggaatacca
ggtgcaccaggccaaagaggagaacgaggtataatgggcaatttaggaattcctggacct
cctggtgtctttggacacccaggcattccaggaaacagaggttctcctggccttccagga
ctgaagggaagaaaagggtttttaggggcaaagggtgaaccaggtgataaaggatttcct
ggaccatcagagaccacagggaatcctggggataaaggagaaccaggatcaaaaggattt
ccaggaagaataggtctgaaaggagaaagaggagataaaggtatacaaggatcagcaggg
cttgatgggacatcaggagtatcaggtctgccaggtcccaaaggatttgtaggtctgcaa
ggaattcctggaagacaaggattaccaggacctccaggagacagaggtgatatgggagtg
ccaggttctaaaggggagagaggatctcaaggtttaccaggaccatctggtgcacaaggc
cctccaggccttcttggttttccaggtgataaaggagaaccagctagttcagcatctggg
cctccaggaaaaccaggaccaaagggtgatccaggtcccccaggagaaatgggaagaaaa
ggggaaagaggatcaccaggtcagccaggacttgtaggagaacctggactagctggaaac
aggggggattgtggaaaaccaggcgctccagggccatctaaatgtgctggagatactggc
gctaaaggctgcaagggggtggcaggaccgagaggcactgaaggccctccaggtgcaata
ggagcccctggagccaacggagctgttggggaaagggggaatcaaggacgggatggtatt
cctggcttcccaggagaaaagggagaacgaggtgcaccagggtggcagattaaaggcctg
caaggtatttctggtcctaaaggaatcaaaggtgacgtggggattcctggttgtccagga
ccagaaggtattaaaggtctaatgggggatccaggaccaattggacctcctggattgaat
ggaaagccaggattcccaggtgcaccaggcataatgattcccggccagaaaggaaataaa
ggtcttcccggagtggatggaagacagggtattcctggtagtccaggatcttctggaacc
cctgcgtacagcataaaaggaaacaaaggtgttagaggtatagatggcataccaggacca
ccaggattggtaggcaatattggtcctcaaggtttaacaggagttgaaggcaccccaggc
aatgtaggccctagaggtgaacctggctttccaggacttccaggtgtaacaggagaaaag
ggtaatcgaggaccccctggaccaatgggtgcagctggacctatcggaccaaagggcccc
cctggtcagcctggagcacctagtaaagcaacatatatcccaggaaaccaaggacctgct
ggatcacctggaagcccaggactaccaggagatccaggacctcaagggccaccaggatta
catggacctcaaggtgtaaaaggcctaccaggccattgtggaaatccaggcatacttgga
ccagttggtccaaaaggagacaaaggatttcaaggacaaagaggacctcctgggcttatt
ggctttccaggagtacggggctcacctggttctccgggtatttccatacctggtccaaca
aggagaggcttcatctttacccggcacagccagtcaacaaagattccttcatgcccatct
gggacagctcagatctacagtggttattctcttctctttgtacaaggaaatgagcaagca
catggccaagaccttgggacagttggtagctgcctgcagcgatttaccaccatgccattt
ttattctgtaacaccaatgacgtttgcagttttgcttctcgcaatgactattcatactgg
ctgtcaactgcagcaccaatgccagaagacatggcaccaatctctggcagagccttacag
ccctatattagcagatgtattgtttgtgaaggaccagcagtggtaatagcagttcacagc
caaacaactgcagttccttcatgtcctcaaggctggatatctctctggaagggtttttcc
tttgttatgtacacaagtgccggttcagaagcctctggccaagcattggcatcacctgga
tcctgcttggaagaattccgtgccattccattcatagaatgtcatggtagagggacatgc
aactactacacaaattcctacagcttctggctggcttcactagatccaagaagaatgttc
aggaagcctttaccacagattttaaaagcaggggaattggaaaacatcatcagccgctgt
caggtctgcatgaagagagacagaaattcttga
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