Mauremys reevesii (Reeves's turtle): 120371612
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Entry
120371612 CDS
T07797
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04382
Cornified envelope formation
mrv04510
Focal adhesion
mrv04512
ECM-receptor interaction
mrv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120371612 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120371612 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120371612 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120371612 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrv04147
]
120371612 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120371612 (COL4A4)
Exosome [BR:
mrv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120371612 (COL4A4)
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120371612 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120371612
NCBI-ProteinID:
XP_039343455
LinkDB
All DBs
Position
LG9:34001977..34074926
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AA seq
1411 aa
AA seq
DB search
MPGLVGPKGSHGPKGAPGNGEKGEKGIPGVPGMQGSPGSCGTLGFPGVKGESGVPGVPGH
AGYSGIKGDRGERGQPGLPGVFGTPPVAMKGPRGDPGSPGPSGEEGLIGLTGPPGPSGRP
GEDGASVPGLPGACGEQGPKGFQGDPGHPGTADSTPGRPGSPGAPGLPGAPGRQGLPGPP
GIVCHGRGLHGQQGIKGQMGPLGRRGEKGEKGNQGHCSCDLGPAGPPGRRGPPGHQGRQG
QMGLPGSDGEKGDPGFSGTIGPTGLPGKPGSSGITGEKGEKGDLARVKIKGIKGKRGPLG
APGLPGQKGTAGRDGDPGLPGERGIQGDGGSALPGDKGFLGAPGLPGSRGPIGPSGLGFP
GPPGIGGHPGDPGSTGISGPPGQMGQKGDIHCYVPPYPGSPGPPGFQGAQGPKGLRGPPG
PPGPNGFDGQKGQRGKPGTSGDIGPDGFRGNAGDPGDEGERGSSPDGAPGFPGTPGLAGQ
KGVPGDNSYGLPGIPGHRGLPGLSGSQGIRGELGAPGLQGQSGRPGFPGPKGLRGRKGEI
GAPGSPGQPCDKGLQGPPGQPGVLGHRGPPGLPGFKGQKGDMGPPGPAGMKGLPGTPGVP
GSPGPPGPRGYPGLPGNDGLPGVPGQRGSKGIQGIQGFPGIPGKEGRTGIPGGNGEQGEM
GSRGPPGECGDGGRKGERGAQGDSGFITLWLEKGQKGEQGLPGEVGFPGETGEKGSPGIR
GISGFPGKDGLPGTQKGEPGDSGQIGFPGLPGSPGSAGLGGISGFQGQPGDQGERGLPGI
PGCPGHDGTKGLKGNRGDSGSQHGPPGQRGPPGDRGSPGPCGFPGEQGLPGFQGEPGRQG
PKGMPGSPGAKGFPGAICDSGLPGVPGEQGNTGPLGAAGLPGLPGPPGRKGLSGLPGLDG
LNGLEGQKGSPGVPGQSEIGPPGYTGAPGPKGDKGEPGHPGVSLPGPPGDMGLPGHPGRT
GDPGPAGPVGRSPETAASGPPGGQGLPGSDGIRGLPGNPGPPGKSIFVKGDPGEFGVPGA
PGIPGQPGQQGAKGFPGNRGRGGLKGPIGNAGPQGPPGPFGPSGDRGFQGQPGPRGPEGC
RGDPGEPGETEHSPCPKTPGPRGVIGQRGAEGSIGFPGPIGYPGPPGSKGEEGLFGLPGQ
DGSPGPPGPSGDQGVIGERGYTGPEGPPGQAGIPGPPAPETRAASGFLLILHSQSDKEPF
CPEGMPRLWIGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPFVYCNINQVCYYASRNDK
SYWLSAAAPLPMMPLSEDEIQPYISRCAVCEASGQAVAVHSQDQSIPPCPLNWRSLWIGY
SFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTIVRPEL
QFVSAPLSETLKEGQEQRKKISRCQVCMKHG
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggttagtaggacccaaaggatcacatgggcccaaaggtgcacctggaaatgga
gagaagggtgaaaaaggtattcctggagtccctggaatgcagggtagccctggttcttgt
ggaactctcggttttccaggagtaaagggggaaagtggagttcctggtgttcctggtcat
gctggttattcaggtataaagggggatcgtggagaacgagggcaaccaggcctgcctgga
gtttttggaacaccacctgttgctatgaaaggtcctcgaggggatcctggatcaccaggt
ccttctggagaggaggggttgattggactaactggtcctccaggcccatcaggaagacct
ggtgaagatggagcaagcgtccctggtctgccaggagcatgtggggaacaaggtcctaaa
ggttttcaaggggaccctggtcaccctggaacagctgactcaactccaggaagaccaggg
tctccaggagcaccgggattaccaggagcaccaggaagacagggtttgcctggaccacct
ggtatagtttgtcatggcagaggacttcatggacagcaaggaataaaaggccaaatggga
cccctgggaagaagaggtgaaaaaggagaaaaagggaatcaaggccactgttcatgtgac
cttggtcctgctggcccacctggtagacgagggccacctggtcatcaaggaaggcaagga
cagatgggacttcctggaagcgatggagaaaagggtgatccaggtttctctggcacaata
ggaccaacaggactcccaggcaaacctggttcttctggaataactggtgaaaaaggagaa
aagggtgacctggccagagtgaaaatcaaaggaataaaaggaaaaagaggccctctgggg
gctccagggcttccaggccaaaaaggtactgctggcagagatggagatccaggattgcct
ggagagagaggaattcaaggtgatggtggatcagcactgccaggtgataaaggatttctt
ggggcaccaggacttcctggttcaagagggcctataggaccatcaggtttgggatttcct
ggcccaccaggaatcgggggtcatcctggagacccaggaagtactggtataagtgggcca
cctggtcaaatgggtcaaaaaggtgacatccactgttatgttccaccatatcctggaagt
ccaggccctccaggttttcaaggggctcaaggaccaaagggattaagaggaccccctggt
cctcctgggccaaatggctttgatgggcaaaagggccaacgaggcaaaccagggacatca
ggagatatagggccagacggctttcgaggcaatgctggtgatccaggtgatgaaggtgaa
aggggttcttctcctgacggtgccccaggttttcctggcactcctggacttgcaggccag
aaaggtgttccaggtgataacagttatggtcttccaggaattccaggccacagaggattg
ccaggattatctggctcacaaggaatacgaggtgaattaggtgctcctggactacaagga
cagtctggcagaccaggatttccaggtcctaaaggtctgagaggcagaaaaggtgaaata
ggcgctccaggctcacccggccagccatgtgataaaggcttgcaagggccaccaggacag
ccaggagttcttggacaccgaggccctccaggcttaccaggttttaaaggccagaaagga
gacatgggcccaccagggccagctggaatgaaaggcctaccaggaactcctggtgtccca
gggtcccccggtcctccaggccctcgaggatatcccgggcttcctgggaacgatggatta
cctggcgtcccgggccaacgaggtagcaaaggcatccaaggcatccaaggtttcccagga
atcccaggaaaagaaggacggacaggaatcccgggtggaaatggtgaacaaggagaaatg
ggttcaagggggcctcctggagaatgtggggatggagggcgaaaaggtgaaagaggtgct
cagggagacagtggcttcattaccttatggctggaaaaaggacaaaagggagaacaaggg
ctccctggtgaggttgggtttccaggggaaacaggtgaaaaaggtagtcctggaatcaga
gggatctcaggatttccaggcaaagatggactcccgggaactcagaagggtgaacctggt
gatagtggacagattgggtttccagggctgccaggctccccaggatcggcgggtttagga
ggaattagtggttttcaagggcaaccaggtgaccagggtgagcgaggtttaccgggaatt
cctggatgtccaggacatgatggtacaaaaggacttaaaggtaacagaggtgactcaggc
agtcaacatggtccgcctggtcaaagagggcctccaggagatcgtggatcaccaggaccc
tgtggattcccaggagagcagggtttacccggtttccaaggggaacctggaagacaagga
cccaaggggatgcctggatccccaggagcaaaaggctttccaggtgccatatgtgattcg
ggattgccaggagttccaggtgaacaaggtaataccgggcctttaggagctgcagggttg
ccaggattacctggtcccccaggcaggaaaggtttatcagggttgcctggattagatggc
ttgaatggactggaaggtcaaaagggctcaccaggagttccaggtcaaagtgaaataggg
cctccaggatacacaggagcacctggaccaaaaggagacaagggtgaacctggacaccca
ggagtttctcttccaggacctcctggagacatgggtttgccaggacacccaggtagaaca
ggagatcccgggcctgcaggacctgtgggaagatctcctgaaactgcagcttctggtcct
ccaggtggtcaggggctacctggctcagatggcatcagaggcctgcctggcaatcctggc
cctcctggaaagtctatctttgtgaaaggtgatccaggggaatttggtgttccaggtgca
cccggtattcctggccagccagggcagcaaggagccaaaggctttccaggaaatcgagga
agaggaggcctgaaaggtccgataggaaacgctggcccccagggtccccctggccctttt
gggccatctggggatcgaggttttcaaggacaacctggccctcgaggtcccgaaggttgc
agaggtgaccctggtgaaccaggagaaacagaacactccccatgtcccaagacaccgggt
cctcgtggagtaataggacaaagaggagctgaagggtctataggatttccaggcccaata
ggttaccctggacccccaggaagtaaaggtgaagaagggttgtttggcttgccaggtcaa
gatggctcacctggtccaccaggaccctcaggtgaccaaggtgtcataggagaacgagga
tacactggtccagaaggtccacctggccaagctgggatcccaggaccaccagcccctgaa
actagagctgctagtgggttcctcctcattcttcatagtcagtcagataaagaaccgttt
tgtcctgagggaatgccaagattgtggataggctatagtctgctgtatctggaaggacag
gagaaagctcataatcaagatcttggtctggctggatcctgtcttcctgtattcaacacc
atgccatttgtctactgcaacatcaaccaagtttgttactatgccagtcgaaatgataag
tcctactggctgtcagctgctgctcctttaccaatgatgccgctctctgaagatgaaata
caaccctacattagcagatgtgctgtatgtgaggcctcaggccaagctgttgcagttcat
agccaagatcagtccattcccccatgcccattgaactggagaagtctttggataggctat
tcttttttaatgcacactggatctggagatcagggaggtggacagtcccttatgtcacct
ggaagttgccttgaagactttagatcagcaccattcattgaatgccagggtcagcgggga
acatgccaattttttgctaatgaatatagcttctggttaacaatcgtccggccagaattg
cagtttgtgtctgctcctctgtcagaaactcttaaagaagggcaggaacagcgcaaaaaa
atcagcagatgtcaggtgtgcatgaagcatggctaa
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