Mauremys reevesii (Reeves's turtle): 120372098
Help
Entry
120372098 CDS
T07797
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120372098 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrv04131
]
120372098 (VPS8)
Membrane trafficking [BR:
mrv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120372098 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
TPR_Vps41
zf-RING_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120372098
NCBI-ProteinID:
XP_039344765
LinkDB
All DBs
Position
LG9:49011731..49265210
Genome browser
AA seq
1405 aa
AA seq
DB search
MEPGSLGAEQGASLPGPAEELGALLGQDAALPQLSGGELDRELESKSDLIDDKEFDIPQV
DTPPTLESILNETDDEEESFVLEDPSLLNIDNIDTHSYDTSSLASSDSGDRTHLKRKKKL
PDSFSLHGSVVRLSLLKGISAQIVSAADKVDAGLPTAIAASSLIAVGTSHGLALIFDPNQ
ALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPG
TAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAK
TELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNS
VNPMLAFCRGDVVHFLLVKRDDSGAIHVTKQKQLHLHYDLINFTWINSRTVVLLDSVEKL
HVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSCGGQI
FYLGTKSVHVMMIRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSKRKAV
IADRMVEILFHYADRTLKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRTDLLFSQMYDK
LSENSVAKGVFLECLEPYILSDKLMGMTAQVMKDLLLHYQDKNLMEDMEACIVHMDITSL
DIQQVVLLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEKVVMGNK
LLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASADEEVYPYVRTLLHFD
TREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAK
PNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIPMAEKAE
FYQICEFMYEREHLYDKIIDCYLRDPVRKEEVFNYIHNILSIPGYSAEEKQSVWQKAMKH
IEELLLLSPNKAADLIATHFNDQIEGIIKNLQDQFLLFQFLRSLLDPREGINQDMLQISP
CVTEQFIELLCHYSPDQVLETLQVLEFYRLEETIQITQKHLLHEASSYLLEKKGDVHGAF
LVMLEQLQSKLLVLTHEIEESTELDLLKDIEDTLVKTIALCQRNSHSLNQQQREALWFPL
LEAMMSPQKLSSSTVLCQYSEPLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGE
IQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASITRGLNPKQDYCCICLQQYK
RRQEMADEIIVFSCGHLYHSLCLLSKECGIETKGQMRWTCYKCNSSNKGGKLSENFSELK
KGNGASLAQSSSESLLDSQQIQAFDQLCRLYRGTSRLALLTELSRTRGGEKHGLLNVSQG
DPALNSVFQNENFQLHLAPPPLTEE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgggagcctcggcgcggagcagggcgcctctctcccggggcccgccgaggag
ctgggggcgctgctgggccaggatgccgcgctgccgcagctgagcggcggggagctggac
cgggagctggagtccaaaagtgacctgatagatgacaaagagtttgatattccccaggtt
gatacccctccaacactggaaagcatattaaatgagactgatgatgaagaggagtctttt
gttcttgaggatccctctcttttaaacattgataatattgacactcactcgtatgacaca
tcttccttggcaagctcagacagtggggacaggacgcacttgaaaagaaagaaaaaactt
cctgattctttctctcttcatggatcggttgtccgtctttctcttctgaaaggaatttct
gcccaaatagtatctgctgcagacaaagtggatgctggtttacctactgcaatagcagcg
tcaagtctgatagcagtggggacttcccatggtttagcattaatttttgatccaaaccag
gctcttcggctttgtctgggcagcactgctgttggggcccagtatggggctatctcggct
ctcagtatcaacaatgactgttcaagactactgtgtggctttgcaaaaggacagattacc
atgtgggatctggctagtgggaaacttttaagatcgataacagatgctcatcccccagga
acagcaattttacatatcaagtttacagatgacccaacacttgcaatttgcaacgacagt
ggaggctccgtgtttgagttgtcatttaagagagttatgggtgtgagaacgtgtgagtct
cgatgtctgttcagtggttccaagggagaagtttgctgtattgagcccttgcatgcaaag
actgaattgagagatcatcctatcacccagtactcactactagcaatggcttccctaact
aagattctagtcattggcttgaaaccatctttgaaggtgtggatgacttttccctatggt
cgtatggatccctctagtgtcccattgttggcgtggcattttgttgctgtacagaactct
gtgaatcccatgcttgctttctgtcgaggagatgttgttcattttcttttggtgaagaga
gatgactcaggtgcaatacatgttactaagcaaaagcaacttcatctgcactatgacctc
atcaattttacttggataaactcacgcacagtagtgcttctggacagtgtggagaagctg
cacgtgatagatcgccagactcaggaggagctggaaactatagagatttcggaggtgcag
ctagtatataacagcagtcacttcaaatcactggccacaggaggcaatgtcagtcaagca
ttggccctggttggggagaaagcctgttaccagtccatcagcagctgtggtggtcaaatc
ttctatcttggcacaaagtctgttcatgtgatgatgataaggagctggagagagagagtg
gatcaccttctgaaacaagactgtcttactgaggccctggctctagcgtggtcttttcat
gaaggtaaagcaaaggctgtagtagggttgtctggggatgtcagtaagcgaaaggctgtc
attgcagaccgaatggttgaaatcctcttccattatgctgatcgaactttgaagaaatgt
cctgaccagggaaaaatccaagttatggagcaacactttcaggatatggtgcctgtcata
gtcgattactgccttttacttcagcgaactgaccttctgttcagccagatgtatgacaaa
ttgagtgagaactcagtggcaaagggtgtttttctggagtgcctggagccttacatttta
agtgataagttgatgggaatgacagctcaagtgatgaaagacttgctgcttcactaccaa
gataagaacctaatggaggacatggaggcctgcattgtgcatatggatatcaccagccta
gacatacagcaggtagttctcctgtgctgggaaaatcatctgtatgatgccatgatctat
gtgtacaacagtggaatgaatgacttcattagtccgatggagaaattgttcaaagtcatt
gctcctccacttaatgctggcaagtctctcacagatgagaaggtggttatggggaacaag
ctccttgtgtacataagttgctgtttagcaggccgtgcttatccattgggtgatattcct
gaagatctggtacccttggttaaaaaccaggtgtttgaatttcttatccgtctccactca
gctgaagcatctgcagatgaagaagtctacccatatgttcgtacgctactgcactttgat
accagagagttccttaacgttcttgcactgacttttgaagactttaagaatgacaagcaa
gcagtggagtatcaacaaagaattgtggacatcctgctaaaggttatggtggaaaattct
gatttcaccccatcacaagttggctgtctttttacctttcttgcccggcagctggctaag
cccaacaatacactgtttgtaaacaggaccctttttgaccaggtccttgaatttctgtgc
agccctgatgacgattcccgacactcggagagacagcaggtccttttagaactactgcaa
gctggagggatagtacagtttgaagagaatcgtctcatccctatggcagaaaaagctgaa
ttctaccaaatttgtgagtttatgtatgaacgggagcatctctatgacaaaatcattgat
tgttacttgcgtgatccagtgagaaaggaagaagtgttcaactacatccacaatatccta
tccattcctgggtacagtgccgaggagaagcagtcagtgtggcagaaggctatgaaacac
attgaggagctgctgttactgagcccgaataaagcagcagatctgatagccactcacttc
aatgaccagattgagggaatcattaaaaatcttcaggaccaattcttgcttttccagttt
ttgagaagtctccttgacccaagggaaggtatcaatcaggacatgctacagatatctccc
tgtgtcactgaacagttcattgagttgttgtgtcactacagtcctgaccaggttttagag
acactgcaggttctggagttctacagactggaagagaccattcagattacccagaaacac
ctgctccatgaagcttcctcctacctgctggagaagaaaggagatgttcatggtgccttc
ctagtaatgcttgagcaactacaaagcaagttgttggtgcttacacatgaaattgaagaa
tcaacagaactcgacttattaaaggatattgaagataccttagtgaaaacaattgcactt
tgccagaggaattcacatagtttaaaccagcagcagcgagaggcactctggtttcctctc
ctggaggctatgatgtcaccacagaagctatccagttcaacagtgttgtgtcagtattct
gaacctctgaagagtttgacaatgcaagtgctaaacaacatggctgcatttattgccctt
ccctcaatcttgcagagaattctccaggatccagtttatggtaaagggaaacttggagaa
attcagggacttgtactggggatgctggacacatttaactatgagcaaacccttctagag
acaactactaacctcctgaaccacgatctccactggtccttgtgtaacttgagagcctcc
atcactagagggcttaacccaaagcaggattactgctgtatctgtctgcagcaatacaag
agaaggcaagagatggctgatgaaatcattgtcttcagttgtggccatttgtaccactca
ctctgtctgctgagtaaagagtgtggcatagaaaccaagggacagatgagatggacttgc
tataaatgcaactcgagtaacaaagggggaaaactgagtgagaatttctcggagctgaaa
aagggaaatggtgcatctctggcacagtcaagctcagagtccctgttggattcccagcaa
atccaggcttttgaccaactctgtcgactctatcgaggaacctccaggttagctctcctg
acagaattgtctcgaactcgtggtggtgaaaaacatgggcttctcaatgtctctcagggt
gaccctgcactgaacagtgtcttccagaacgagaatttccagttgcatctcgctccccct
ccactgacagaagagtag
DBGET
integrated database retrieval system
