Mauremys reevesii (Reeves's turtle): 120372245
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Entry
120372245 CDS
T07797
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120372245 (TNRC6B)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120372245 (TNRC6B)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120372245 (TNRC6B)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120372245 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
120372245
NCBI-ProteinID:
XP_039345106
LinkDB
All DBs
Position
LG1:269156547..269396669
Genome browser
AA seq
1971 aa
AA seq
DB search
MRKVSGVRASPAGEASGREEPPPALRRRGLRAPGRRRLLGGFCFCTECSQDGSLWALAAR
GNCQRHYFAFLQFCTDSVPMQTDEGEILEEGSPKMEHEDFVMEGHGKTPPPGEENKQEKE
QEREEQLMEDKKRKKEDKKKKESTQKVTDQKTKVPEVTKPSSSQPVAASPIGSSPSPPVN
GGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGLP
PSSAPGANPNNAQPVTGALLQSDSGTATDSTIGGAAASNYANSTWGSGAASNNGTNANPT
HVWDKVIVDGSDMEEWPCIASKDAESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQ
CQSGSAGKECNLGAWKSDPKAKSVQSSNPAAESNNGLGNWRNLSGQDRIGPGSGFSNFNP
KSNPSAWPALVQEGNSRKGILESDNGNANAQISTVSQTSREQQSKMENAGVNFVVSGREQ
AQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFEMGLGNPSRSTDAPSQSTGERKTGSVGS
WGTSRGPSGTDTAAGQSNSGNHGNNGKDREDSWKGVSVQKPNGSRNDSWDNNNRSMGGGS
WNFGPQHSNENKWGEGNKLTSGVSQGEWKQPSGSDELKIGEWSGPNQPNSSTGAWDNQKG
HPLPENQGNSQAPCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAV
LQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNS
GGWGDAPSQSNQNKSGWGELSTPTEWKDPKNTGGWNDYKNNNSSSWGGVRPEEKPSSWND
NSNKDQGWGGRQPNQGWSSGKNGWGEEVDQTKNSNWEGAGNKPVSGWGEGGQNEIGTWGN
GANANAASKGGWDDCKRTPAWNENGRQPNSWNKQHQQQQEASVSWGPPPPGNGRPPNPNW
NSGPQPAAPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQ
APREQSLPTPMTSKSTASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGN
APSNAPNTMKPSSKSMQDGWTESDGPVTGTRHSSWEEEEEGGVWNTASSQGSSSSHNSTS
WGQGGKKPQIKCSLKGGNSDSWMNPLSKQFSNMGLLSQTEDTQGSKMDMSVGGLPDKKFD
VDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCS
PFSPSPSYKLSPSGSTLPNVSLGAIGSGLNPQNFAARQAGNHGLFGNSTAQSRGMHTPVQ
PLNPSPNIRAQVPPQFLSPQVSASVLKQFPNGGLNPGLFNISPQQIAMLSQLPNIPQFQL
ACQLLLQQQQQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSALQQQQRQPGMKHSPSHP
VGPKSHLDSMVPNALNVGLSDIQTKGQIPGYGSGFGSSGMDYGMVGGKEAGSESRFKQWT
SMMEGLPSVASQDANMHKNGAIVPPGKARGGSPYNQFDIIPGDPLGGHSGPAGDSWLPAK
SPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQ
LLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFNDYKSTWSPDPIGHNPTH
LSNKMWKNHISSRNTTGLPRPPPGLTNPKPSSPWSSTAPRSVRGWGAQDSRLASGEKDLL
IASLLGREGCVLYSANGVDMMRPSQERKLRLPASTWSDGGSVRPSYWLVLHNLTPQIDGS
TLRTICMQHGPLLTFHLNLTQGTALIRYNTKQEAAKAQTALHMCVLGNTTILAEFATDEE
VSRFLAQAQPPTPAATPSAPAAGWQSLETGQNQTDAVGPPLNLFGGSAGLGQWSSSGGSS
SGGDLSGASLWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagtttctggggttcgcgcttccccggcgggtgaagcgagcgggcgggaggag
ccgcccccggcgctgagaagaagggggctgcgcgccccagggcggcggcggctcctcggc
gggttttgtttttgcactgaatgtagccaggacggatccttgtgggctttagcagcccga
ggaaactgtcaaaggcactattttgcatttctgcagttttgcacagattctgttcccatg
caaaccgatgagggagaaatactggaggaaggcagtcccaagatggaacatgaggatttt
gtaatggaagggcatggcaagactccacctcctggtgaagaaaacaaacaagagaaggag
caagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataagaaaaag
aaggaatctactcagaaggtcacagatcaaaaaaccaaagtgcccgaagtgacgaaacca
agttcaagccagccagtggccgccagcccaattggcagctctccatcgccaccagtcaat
ggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgccgcccgc
tacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgttactg
aaacgtgggcagccccctcctccatcctgtatgctacttgggggtggggcagggcttcct
ccctcttcagcacctggagcaaacccaaacaacgcacaaccagtgacaggagcactgctg
cagagcgacagtgggactgcaacagattcaacaattggaggtgctgctgcttcaaattat
gcaaattccacttggggttctggagccgcctccaacaacggcaccaacgccaacccaact
cacgtctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtattgcc
agcaaagacgctgagtcttcttccgaaaataccaccgataacaacagtgcctcgaaccct
ggctcagagaagagcactctgccaggaagcaccactagtaacaaaggaaaaggaagccag
tgtcagtctggaagtgctgggaaggaatgtaatcttggggcctggaaatctgaccccaaa
gctaaatctgttcaatcttccaaccctgctgcagagagtaacaatggactaggaaattgg
cggaacttgagtgggcaggacagaataggccctggttctggcttcagcaactttaaccca
aaaagcaacccatctgcctggccagcactggttcaagagggcaattctaggaaagggatt
ttggagtctgataatggtaacgccaatgcacagattagcacagtaagtcagacctctagg
gaacagcagtcaaagatggaaaacgcgggtgttaactttgttgtctctggcagagaacag
gctcaaatacataacactgatggaccaaaaaatggaaacactaactccttgaacttaagt
tcgccaaaccctatggagaataagggaatgccctttgaaatgggcttggggaacccctcc
agaagcactgacgccccttcacaaagcactggagaaagaaagactgggagtgttggatct
tggggtacatctagggggccttctggaactgacacagccgctggacaaagcaattctgga
aaccatgggaacaatggaaaggatagagaggactcctggaaaggagtttctgttcaaaaa
cctaatgggtcaagaaatgattcttgggataacaacaacaggtctatgggtggtgggtct
tggaactttggccctcagcactcaaatgaaaacaaatggggtgaagggaacaaattgaca
tctggggtctctcagggagaatggaaacagccgtctgggtctgatgaactgaagattgga
gaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggc
cacccccttcctgaaaaccaaggcaattcccaggctccctgttggggaagatcttccagc
tctacaggaagtgaggttggaggtcaaagcactggaagcaaccacaaagcaggaagtagt
gacagtcacaattctggacgccgatcatacaggcctacgcatcctgattgccaagcagtc
ttgcagactttgctgagcaggactgatttggacccccgtgtgctttcaaacactggctgg
ggccaaactcaaattaagcaagatacagtttgggatattgaagagatgccaaggcccgag
gggaaatctgataaaggaactgaggggtgggagagctctgccacacagacaaagaactca
gggggctggggagatgcacccagccaaagcaatcaaaacaagtctggatggggtgagctc
tcaacccccacagagtggaaggaccccaaaaacacaggagggtggaatgactataagaac
aacaattcttctagctggggaggagtaagaccagaagaaaagccttcctcttggaatgac
aattccaacaaggatcaagggtggggtggacggcaacctaatcaaggatggtcttcagga
aagaacggttggggagaggaagttgaccaaacaaaaaacagtaattgggaaggtgcagga
aacaaaccagtgtcaggttggggtgaaggtgggcaaaatgagattgggacttggggtaat
ggtgcaaatgcaaatgccgcttcaaagggtggatgggatgattgtaaaagaacgccagca
tggaatgagaatggtcgacagcccaattcctggaataagcagcaccagcagcagcaggag
gcttctgtctcctggggtccaccacctccaggtaatgggcgacctccaaatccaaactgg
aacagtgggccacagccagctgcccccaaggatgaggaacccagtggctgggaagaacct
tctccacaatcaatcagtcggaaaatggatattgatgatggcacttcagcatggggagac
cctagcagttataactacaagaatgtgaacctgtgggacaagaactcgcaagggggacag
gctccacgagaacaaagcctgcctactccaatgactagcaaatcaacagcatcagtctgg
agcaaaagcacaccacctgctccagataatggtacgtctgcctggggtgagccaaatgaa
accagtcccgggtggggtgaagtagatgatacaggagcatcgacaacaggctgggggaat
gcaccctccaacgccccaaataccatgaaacctagttccaaatctatgcaagatggctgg
acagagagtgatgggccagtaacaggaacacgtcattcaagctgggaagaggaggaggaa
ggaggagtctggaacacagcaagctctcaaggaagcagttcctcccacaactcaacaagc
tgggggcaaggaggaaagaaaccacaaattaagtgttcattaaaaggaggaaatagtgat
tcatggatgaaccctttatccaaacagttttcaaacatgggattgctaagtcaaactgag
gacactcaaggcagtaagatggacatgtctgtaggtggtctcccagataagaaatttgac
gtggacaaacgagccatgaacctcggggattttaatgatataatgagaaaggatcgatct
gggttccgtccacctaattccaaagacatgggaaccacagatagtgggccttattttgag
aagctgactttgcctttctccaatcaagatgggtgccttggggatgaggctccctgctct
cccttctccccttctcccagctacaagctgtctccctctggttccacactacccaacgtc
agccttggggcaatcggctcagggctcaacccccaaaacttcgctgctagacaagctggc
aatcatggtttatttggaaacagcacagcacaatcgaggggcatgcacacaccagtgcag
ccactaaacccttcccccaatatccgggcacaagtgcctccccagtttctttccccccag
gtttctgcctccgtgctcaagcagtttcccaacggtggcttgaacccaggtcttttcaat
atatctcctcaacagattgctatgctgagtcagcttccaaatattcctcagtttcaacta
gcatgtcagcttcttcttcagcagcagcagcaacagcagcagcaacaacagctgttacag
aaccagagaaagatttctcaagctgtgcgacagcagcaagagcaacagcttgctcgtatg
gtgagtgccctccagcagcagcaaaggcagcctggcatgaagcattctccatcccatcca
gttgggcctaagtcgcatttagacagcatggtacccaatgctctgaatgtgggtctctca
gatatacagaccaaagggcaaatacccggatatggttctggctttggttcaagtggcatg
gattatggcatggtgggagggaaagaagctggatcagaatctcgctttaaacagtggact
tctatgatggaagggctgccctccgtagcttcacaagatgccaatatgcacaaaaatggc
gcaatagtgccccctggaaaagcccgtggaggatcgccctacaaccaatttgacataatc
ccaggcgacccgctgggtggccattcaggccctgctggcgatagttggttacctgccaaa
tctccaccaacgaacaagatcggaagcaaatccagcaatgccagctggcctccagagttc
cagccgggagtgccatggaaaggtattcaaaacattgaccctgaatctgacccctatgtg
acccctggaagtgtgttggggggtacagccacctctcctattgttgatactgaccaccaa
cttctgcgggacaacaccacagggtctaattcttccctcaacacctcgctgccttcacct
ggtgcctggccctacagtgcctctgacaattccttcaccaatgttcatagcacttcagca
aaattcaatgattacaaatcaacatggtccccagatcccataggacacaatcccactcat
ctctccaacaagatgtggaaaaaccatatttcctcaaggaacactacagggctgccccgc
ccaccacctggcctgaccaacccaaaaccatcatctccctggagcagcacagcaccccga
tcggtcagggggtggggggcacaggactcaaggcttgcctctggtgagaaggatctcctg
atagcatcattgctcggccgtgaggggtgtgtgttatacagcgctaatggtgtggatatg
atgcggccttcacaagagaggaagttgcggttgcctgcctctacctggagtgatggtggc
tcagttcgtcctagctactggctggttcttcacaatctcactccacagatcgatgggtca
accttgaggacgatctgcatgcagcatggcccactgctgacattccatctgaacctgacc
cagggcaccgccctaatccgatacaacaccaaacaggaggcggccaaggcccagactgca
ctgcacatgtgtgtgttgggaaacactaccatcctggctgaatttgccacagatgaggag
gttagtcgctttctggcacaagctcagcccccgacacctgcagcaaccccaagtgcaccc
gcagcaggctggcaatccctggagacaggacagaaccagacagatgcagttggacctcct
ttgaatctttttggtgggtcagcagggcttgggcagtggagcagcagtggtggcagcagc
agtgggggcgatctctctggcgcttcattgtgggggcccccaaactattcttcaagcttg
tggggggtcccaagtgtagaggatccccatagaatgggcagccctgctcccttactacct
ggagaccttctgggaggagggtcggattcaatctga
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