Mauremys reevesii (Reeves's turtle): 120374666
Help
Entry
120374666 CDS
T07797
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04510
Focal adhesion
mrv04512
ECM-receptor interaction
mrv04518
Integrin signaling
mrv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120374666 (COL6A2)
04518 Integrin signaling
120374666 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120374666 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120374666 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrv04147
]
120374666 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120374666 (COL6A2)
Exosome [BR:
mrv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120374666 (COL6A2)
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120374666 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
120374666 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
DUF4978
Motif
Other DBs
NCBI-GeneID:
120374666
NCBI-ProteinID:
XP_039350617
LinkDB
All DBs
Position
LG11:complement(4769434..4819895)
Genome browser
AA seq
1022 aa
AA seq
DB search
MAQPAFFAVLLCMTLVPLQAQYDEDESIAFSPRSAACPEKIDCPINVYFVIDTSESIALQ
TVPIQSLVEHMKQFIPAFINKLETEAYQNQVSITWNFGGLHFSDVVKIYSTLTNSKDMYI
TRLNGIEYIGRGTFTDCAISNMTNQILTQAVSGVNFAVVITDGHVTGSPCGGMKMQAEKA
RDAGIKLFAVAPSQNIFEQGLREIANLPHELYRNNYATTKRGAIEVDENTIDRIIQVMKH
EAYGECYKMSCLEITGPPGPKGYRGQKGAKGNMGEPGGPGLKGRRGDPGIEGPIGYPGPK
GIPGLKGEKGEFGGDGRKGATGLAGRNGTDGQKGRLGRIGAPGCKGDPGDKGPDGYPGDA
GNQGEPGDEGVKGELGRPGRNGPPGPPGEKGNKGAIGNNGAPGSPGAKGSKGRPGPVGPK
GEPGRRGDPGTKGSPGSTGTKGEKGDPGPEGPRGLAGEVGSKGARGDRGLPGPRGPQGVV
GEPGRPGSRGDPGDMGPRGNSGPPGPKGDRGRPGFSYPGPRGLGGDKGETGPRGPEGGRG
DPGPKGDPGRKGDKGEVGDLPQPGQPGPRGESGKKGDEGDPGPPGDPGLTECDVMTYVRE
TCGCCDCEKRCGALDIVFVIDSSESIGYTNFSLEKNFVINVVSRLGSIAKDPKSETGARV
GVVQYSHEGTFEAIQLNDERINSLSNFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESKR
EKARVFAVVITDGRHDPRDDDNNLRAFCQGDVIVNAIGIGDMFNQPDQDETLHSIACNDQ
QHVQKMKLFSELVAEEFIDKMEDVLCPDPQIVCPELPCQTELAVAQCTQRPVDIVFLLDG
SERTGEVNFRRAHHFVEEVSNRLTLARGDNDNMNARIALLQYGSEREQEVIFPLTYNMTY
ISEALSNIKYLDSSSNIGSAIIHAINNIVINPQNQQRAARRNAELSFVFITDGITGSKNL
NEAINSMKKQDVMPTVVALGSDVNMDVLLKIGLGDRAAIFREKDYVSLSQPGFFDRFIRW
IC
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccagccttttttgccgttcttctttgcatgacgctggttcccctccaggct
cagtatgatgaggacgagtccatagccttcagtcctcgctcagctgcctgcccagagaag
atagactgccccatcaatgtgtactttgtcattgacacctcggagagcattgccctgcag
actgtgcccatccagagcctggtggaacacatgaagcagttcatcccagccttcatcaat
aaactggagaccgaggcctaccagaaccaagtctccatcacatggaatttcgggggactt
cacttctcagacgtggtgaagatttacagcaccttgaccaacagcaaggacatgtacatc
accaggctgaatggcatcgagtacattggccgaggcacgttcacagactgcgcgatctcc
aacatgaccaatcagatcctgacccaggcagtctctggcgtaaactttgctgtagtcatc
acagacggccatgtgacgggcagcccttgtggcgggatgaagatgcaggccgagaaggcc
cgggatgcaggtatcaagctctttgcagtggcccccagccagaacatcttcgagcagggt
ctccgggagatcgccaacctcccccatgagctgtaccgcaacaactatgccaccaccaag
agaggtgccattgaggtggatgagaacaccattgaccggattatccaagtcatgaaacat
gaagcctatggagagtgctacaagatgagctgtctggagatcacaggcccacctgggccc
aagggctaccgggggcagaagggtgcaaaggggaacatgggtgaaccaggaggtcctggg
ctcaaagggcgacggggtgacccaggtattgaaggtcccatcggataccctggtcccaag
ggtattcctggtctgaaaggagagaagggcgagtttggaggcgacggccggaagggggca
actggtttggcaggaaggaacggcaccgatggacagaagggccggctgggacggattgga
gcccctggctgcaagggagaccctggggacaagggccctgatggttatccaggagatgcg
ggaaatcaaggagaaccaggagacgaaggcgtaaagggagaacttggccgccccggccgc
aatggacctccaggacctccaggagaaaagggaaacaagggagctataggaaacaacgga
gcccccgggagccctggtgccaagggaagcaaaggccgcccgggacctgttggacccaaa
ggagagccgggtcgtcgcggggaccccgggacaaaaggcagcccaggatccactgggacc
aagggagagaagggagaccccggccctgaaggcccccggggcctggctggagaagtcggc
agcaaaggagcaaggggcgaccgaggactgccggggccccgaggcccgcagggtgtcgtg
ggagagccaggcaggcctggatctcgtggggacccaggcgacatgggcccaaggggaaac
tcagggcccccaggaccaaagggagaccgaggcagacctggcttcagctaccctggcccc
agaggacttgggggcgacaaaggcgagaccgggcctcgtggtccagagggtggacggggt
gacccgggaccgaaaggcgatcccgggaggaaaggagacaaaggggaagttggcgacctc
ccccaacccggccaacccggccccagaggtgaatcaggcaaaaagggcgacgagggggac
ccgggcccacctggagatcctggcctgaccgaatgcgatgtgatgacctacgtgagagaa
acctgcggctgctgcgactgcgagaagcgctgtggtgccctggacatcgtgtttgtcata
gacagctccgaaagcatcggctacaccaacttctccctggagaagaactttgtcatcaac
gtggtcagccgcctgggctccatcgccaaggaccccaagtcagagacaggtgcccgggtc
ggggtggtgcagtacagccacgaggggacgttcgaggccatccagctcaacgatgagcgc
atcaactcgctgtccaacttcaaggaggcggtgaagcgtctggagtggatcgccgggggc
acctggacaccctccgccctacagtttgcctacaacaagctcatcaaggagagtaagcga
gagaaagcccgtgtgtttgccgtggtgatcacagacgggcgccacgatccgcgagacgat
gacaacaacctccgggccttctgccagggagacgtgatcgtcaacgccatcggcatcgga
gacatgttcaaccagccagaccaggatgagaccctgcactccattgcatgcaacgaccag
cagcacgtccagaaaatgaagctcttctcggagctggtggctgaggaattcattgacaag
atggaggacgtcctctgcccagatccacagatcgtctgcccggaactgccctgccaaaca
gagctggcggtggctcagtgcacacagcgccctgtcgacatcgtcttcctgctggatggc
tcggaacgaacgggcgaggtgaacttccgcagggcccaccactttgtggaggaggtgtcc
aaccgcctcacgctggccaggggtgacaacgacaacatgaatgcgcggatcgccctcctg
cagtatggcagcgaaagagagcaggaggtgatcttccccctgacatacaacatgacctac
atctcagaggccctgtccaatatcaagtacctggactcctcctccaacatcggctcggcc
atcatccatgccatcaacaacatcgtcatcaacccgcagaaccagcagagggctgcccgg
cgcaacgccgagctctccttcgtcttcatcaccgacggcatcacgggcagcaagaatctc
aatgaggccatcaactccatgaagaagcaggatgtcatgcccacagtggtggccctgggg
agtgatgtgaacatggatgtcctgctgaagattggcctaggggaccgagctgccatcttc
cgggagaaggactatgtcagcctctcccaacccggcttcttcgacaggttcattaggtgg
atatgttag
DBGET
integrated database retrieval system
