Mauremys reevesii (Reeves's turtle): 120375029
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Entry
120375029 CDS
T07797
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120375029 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120375029 (BARD1)
04121 Ubiquitin system [BR:
mrv04121
]
120375029 (BARD1)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120375029 (BARD1)
03400 DNA repair and recombination proteins [BR:
mrv03400
]
120375029 (BARD1)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120375029 (BARD1)
Ubiquitin system [BR:
mrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120375029 (BARD1)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120375029 (BARD1)
DNA repair and recombination proteins [BR:
mrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120375029 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
ANK_LRRK2
zf-C3HC4_2
NIBRIN_BRCT_II
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
120375029
NCBI-ProteinID:
XP_039351515
LinkDB
All DBs
Position
LG11:11621786..11688422
Genome browser
AA seq
806 aa
AA seq
DB search
MRAALRARSGNQPAPAGRAAPAPAPLGMEPPAGCWDSTRAALRQLEGRLLCSRCMNILKE
PVCLGKCEHVFCLACVGDCIGTECPVCHTPAWVQDVQINRQLDNMIQLCSKLRHLLGKDF
SDSAEDLFTPVGPDHETRSKKRQIKMWFSPRSRKIRCVLNNSSLQKQNQLVTNGGSINQG
PSSAFDFLPSPPQEKPFKMTKEPPPHRSKKKLKKKSLADINKVWGIEKEKQKEGSGTEGE
TQDEFKEKTVTFCSQSLVLCSPEPHSTEETIGQTNFVMETDLKDGRESHSEMATQVKPTE
DKDSSAQVNIMNGFNKPLPSENEITPLKRRRQQSISPAISHAKRLRRSDQSADMHSVNQG
VCNPEITAMSTVKISPTTEQGTPVHISSPAFKLTGGTLSKTRSSVIFQEINSPSLSKTPS
TPFTSNTHNQMKTTHSPSLLKKSPSNNTTTKRNHRGETLLHVASIKGDVSAVEHLLKNGA
DPNVKDHAGWTPLHEACNHGHKKVVELLLQHRALVNTTGYQNDSPLHDAARNGHVSIVQL
LLSHGASRDAVNIFGLRPVDYAETAKMKSVLMLPVKNESYSFSQCSEQASPGRPREGPVA
LLGSSLNSEQQKSLSKLAAVLKARKCVEFNSTVTHVIIPDDPMRSTIKGMLAILAGCWVL
KFEWVKACLQSRIREQEEKYEICGGPRRGRLNQEQLLPKLFDGCYFYFLGTFNHHQKSDL
IELVKAAGGQILVRQPKPDSDVTQTINTVAYHAEPGSDQCFCTQYVIYDVSSKYNPDKIR
QGKVWMAPSSWLIDCVMSFQLLPITK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgcgctgcgggctcgctccgggaaccagccggcaccggcagggagggctgcc
ccagcccccgccccgctcggaatggagccgcccgccggctgctgggacagcacccgggcc
gccctgcggcagctggaggggcggctgctctgctcccgctgcatgaacatccttaaggaa
cctgtgtgcttgggaaaatgtgagcatgttttctgtctagcttgtgtgggtgactgtatt
ggcacagaatgcccagtgtgtcacactccagcctgggtacaagatgtgcaaataaatagg
cagctagacaacatgatccagctgtgcagcaaactgcgacatctactgggcaaagacttc
tcagattctgcagaagacttgttcacgccagtaggtcctgatcatgaaacaagaagtaag
aagaggcagataaaaatgtggttcagcccacgcagtaggaagatcagatgtgtgctaaac
aatagttcccttcagaagcagaatcaactggtgactaatggtggcagcattaaccagggc
ccatcttctgcttttgacttccttccttctcctcctcaagagaagcctttcaagatgacc
aaggaaccaccaccacacagatcgaagaaaaaactgaagaaaaagagtctagcagacatc
aacaaagtgtggggtatagagaaggaaaagcagaaagagggcagtggaaccgaaggggag
acccaagatgaatttaaagaaaagactgtgaccttttgcagccagtcattagttttatgc
agccccgaaccacatagtacggaagagacaataggacagacaaactttgtaatggaaacc
gaccttaaggatggaagagagtcccactcggaaatggccacacaagtaaaacccacagag
gataaagatagctctgcacaagttaacataatgaatggttttaataaacctctgccatca
gaaaatgaaattactcctttaaagcgcagaaggcagcagtccatatcccccgctatatct
catgctaaaagactgagaagaagtgatcagagtgctgatatgcactcagtcaaccagggt
gtttgcaatcctgagataactgccatgagcactgttaaaatctctccaactactgaacag
ggaactccagttcatatctcctctcctgcatttaaacttactggtggcaccttatcaaag
acaagaagctctgtaatttttcaagaaatcaatagcccttcactttcaaaaactccttct
accccattcacttcaaatactcataatcaaatgaaaacaacacacagcccttccctcttg
aagaagtctcctagtaataacacaactaccaaaaggaatcacagaggagagaccttgctc
cacgttgcgtccatcaagggtgatgtatcagccgttgaacacttactgaaaaatggagca
gaccccaatgttaaagaccatgctggatggacaccattgcacgaggcttgtaatcatggg
cacaagaaggtggtggagctattgctacagcacagggcattggtgaacactactgggtat
cagaatgactcaccgcttcatgatgctgccaggaatgggcatgtgagcattgttcagctg
ttgctctcacatggagcctcccgggatgcagttaatatattcggtctgcgccctgtggac
tacgcagaaactgcaaagatgaagtctgtgctaatgctaccagtgaagaacgaatcatat
tcatttagtcaatgctcagaacaagcaagcccaggccgccctagagaaggacctgttgct
ctactgggaagcagcctcaattcagagcaacaaaaatcactgagcaaactcgcagcagtt
ctgaaggctagaaaatgtgttgagtttaacagcacagtgactcacgtcattatccctgat
gatccaatgcgaagtactatcaaagggatgctggccattctggctggatgttgggtcctg
aaatttgagtgggtgaaggcatgtttgcaaagcagaattcgtgaacaagaggagaagtat
gaaatctgtggtggcccacgaagaggcagactcaaccaagaacagctgctgcctaagttg
tttgatggttgctacttctattttttgggaactttcaaccaccaccagaagagtgacctc
atagagctggttaaagcagcaggaggacaaatcctcgttaggcagccaaagccagatagc
gacgtgacacagaccatcaacacagtggcataccatgccgaacctgggtctgatcagtgt
ttctgcacacaatacgttatctacgatgtgtcttctaaatacaacccagataaaattcgc
caaggcaaagtctggatggccccctccagctggctcatagactgtgtgatgtcatttcag
ctgttacctattacaaagtga
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