Mauremys reevesii (Reeves's turtle): 120381848
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Entry
120381848 CDS
T07797
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03020
RNA polymerase
mrv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120381848 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
120381848 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120381848 (POLR2A)
03400 DNA repair and recombination proteins [BR:
mrv03400
]
120381848 (POLR2A)
Enzymes [BR:
mrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120381848 (POLR2A)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120381848 (POLR2A)
DNA repair and recombination proteins [BR:
mrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120381848 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
120381848
NCBI-ProteinID:
XP_039355937
LinkDB
All DBs
Position
LG14:complement(13990292..14015697)
Genome browser
AA seq
1969 aa
AA seq
DB search
MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPR
QGVIEKTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKVLRCVCFFCSKLLVDS
NNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPDGDEDLTKEKGH
GGCGRYQPRIRRTGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFILGMEPK
YARPEWMICTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADVVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR
DNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEEMVKDILSNAHIQNELEREFEKMRE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINARLPSDLHPIKVVEGVKELSKKLV
IVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPD
FDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGVGVPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYVPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS
PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS
PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYYPNTPTYSPTSP
KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcacggggggccgccctccggggacagcgcgtgcccgctgcgcaccatcaagcgcgtg
cagttcggcatcctcagccccgatgagatgaaacggatgtcggtgacggagggggggatc
aagtaccccgagacgacggaggggggccgccccaagctggggggcttgatggacccccgg
caaggagtgatcgagaagacgggccggtgccagacgtgtgcggggaacatgacggagtgc
ccgggccacttcggccacatcgagctggccaagcccgtcttccacgtgggcttcttgggg
aagaccatgaaagtgctgcgttgcgtctgcttcttctgctccaagctgctggtggactcg
aacaacccgaaaatcaaggacatccttggcaagtcgaaggggcaacccaagaagcgcctg
acccacgtgtacgacctttgcaaaggcaagaacatctgcgaaggcggggaggagatggac
aacaagttcggggtggagcagccggacggcgacgaggacctgaccaaggagaagggtcac
ggcggctgtgggcggtaccagccccgcatccggcgcaccgggctggagctctacgccgag
tggaaacacgtcaacgaggactcgcaggagaagaaaatcctgctcagccccgagcgggtg
cacgaaatcttcaagcgcatctcggacgaggagtgtttcatcctgggcatggagcccaag
tacgcccggcccgagtggatgatctgcaccgtcctgcccgtgcccccgctctccgtccgg
cccgccgtggtcatgcagggctcggccaggaaccaggacgacctgacccacaagctggcg
gacgtggtgaagatcaacaaccagctgcggcgcaacgagcagaacggggcggccgcccac
gtcatcgccgaggacgtcaagttgctgcagttccacgtggccaccatggtggacaacgag
ctgcccggcctgccccgggctatgcagaaatcagggcgtcccctcaagtccctgaagcag
cggctgaaggggaaagaggggcgcgtgcgggggaacctgatggggaagcgggtggatttc
tccgcccggacggtcatcaccccggaccccaacctctccatcgatcaggtgggggtgccc
cgctccattgccgccaacatgaccttcgccgagatcgtcacgcccttcaacatcgacagg
ctccaggagctggtacgcagggggaacagccagtacccgggcgccaagtacatcatccga
gacaacggcgaccgcatcgacctgcgcttccaccccaagcccagtgacctccacctgcaa
atcggctacaaggtggagcgacacatgtgcgacggggacatcgtgatcttcaaccggcag
cccacgctgcacaagatgtccatgatggggcaccgggtgcgaatcctgccctggtccact
ttccgcctcaacctcagcgtgaccaccccctacaacgccgacttcgacggggacgagatg
aacctgcacctgccccagtcgctggagacgcgggcggagatccaggagctggccatggtc
ccccgcatgatcgtcaccccccagtccaaccggcccgtcatgggcatcgtgcaggacacc
ctcacggccgtccgcaagttcaccaagcgcgacgtcttcctggagcggggtgaggtgatg
aacctgctgatgttcctatccacgtgggacggcaaggtgccccagccggccatcctcaaa
ccccgcccgctctggacgggcaaacagatcttctccctcatcatcccgggccacatcaac
tgcatccgcacccacagcacccaccccgacgacgaggacagcgggccctacaagcacatc
tcgcccggcgacaccaaggtgatcgtggagaacggggagctgatcatgggcatcctgtgt
aagaaatcgctcggcacctcggccggctccctggtccacatctcctacttggagatgggg
catgacaccacccgcctcttctacagcaacatccagacggtcattaacaactggctgctc
attgagggtcacaccatcggcattggggactccatcgctgacgcaaagacctaccaggac
attcagaacaccatcaagaaagccaagcaggacgtcatagaggtgatcgagaaggctcac
aataacgagctggagcccacgccgggcaacacgctgcggcagaccttcgagaaccaggtc
aaccgcatcctgaacgacgcccgcgacaagaccggctcctccgcccagaagtccctgtcc
gagtacaacaacttcaaatccatggtggtgtcgggcgccaagggctccaagatcaacatc
tcccaggtcattgccgtggtggggcagcagaacgtggaggggaagcgcatcccgttcggg
ttcaagcaccgcaccctgccccacttcatcaaggacgactacgggccggagagccggggc
ttcgtggagaactcctacctggccggcctgacgcccaccgagttcttcttccacgccatg
ggcgggcgcgagggcctcatcgacacggctgtcaagacggccgagaccgggtacatccag
cggcggctgatcaaatccatggagtcggtgatggtgaaatatgacgccaccgtgcggaac
tccatcaaccaggtggtgcagctgcgctacggcgaggacgggctggccggggagagcgtg
gagttccagaacctggccaccctcaagccctcgaacaaggccttcgagaagaagttcaag
tttgactacaccaacgagcgggcgctgcggcgcaccctgcaggaggagatggtgaaggac
atcctgagcaacgcgcacatccagaacgagctggagagggagttcgagaagatgcgcgag
gaccgcgaggtgctgagggtcatcttcccgaccggcgacagcaaggtggtcttgccctgc
aacttgcttcgcatgatctggaacgcccagaagatcttccacatcaacgcccggctgccc
tccgacctgcaccccatcaaggtggtggaaggcgtgaaggagctgagcaagaagctggtg
atcgtgaacggggacgacccgctgagccggcaggcccaggagaacgccaccctcctcttc
aacatccacctgcgctccacgctctgcagccggcgcatggtggaggagttccggctcagc
ggcgaggccttcgactggctgctgggcgagatcgaatccaagttcaaccaggccatcgct
cacccgggcgagatggtgggcgccctggcggcccagtcgctgggcgaacccgccacccag
atgaccctgaacaccttccactacgccggcgtctcggccaagaacgtcacgctgggcgtg
ccccggctcaaggagctgatcaacatctccaagaaacccaagacgccctccctcaccgtc
ttcctgctggggcagtcggcccgggacgccgagcgggccaaggatatcctgtgccggctg
gagcacaccaccctacgcaaggtgacagccaacaccgccatctactacgaccccaacccg
cagagcacggtggtggccgaggaccaggagtgggtcaacgtctactacgagatgcccgac
ttcgacgtgagccgcatctcgccctggctgctgcgggtcgagctcgaccgcaagcacatg
accgaccgcaagctcaccatggagcagatcgcggagaagatcaacgccggcttcggggac
gacttgaactgtatcttcaatgacgacaacgcggagaagttggtgctgcggatccgcatc
atgaacagcgacgagaacaagatgcaggaggaggaggaggtggtggacaagatggacgac
gacgttttccttcgctgcatcgagtcgaacatgctgacggacatgaccctgcagggcatc
gagcagatcagcaaggtgtacatgcacctgccccagacagacaacaagaagaagatcatt
atcacggaggacggggagttcaaggccctgcaggagtggatcctggagacggacggggtc
agcctcatgcgggtgctgagcgagaaggacgtggaccccgtgcgcaccacctccaacgac
atcgtggagatcttcaccgtgctgggcatcgaggcagtgcgcaaggccctggagcgggag
ctctaccatgtcatctccttcgacggctcctacgtcaactaccggcacctggcgctgctc
tgcgacaccatgacctgccgcgggcacctcatggccatcacccggcacggggtcaaccgc
caggacaccggccccctcatgaagtgctccttcgaggagacggtggacgtgctgatggag
gcggcggcccacggggagagcgaccccatgaagggggtgtcggagaacatcatgctgggg
cagctggcgcccgccggcaccggctgcttcgacctgctgctggacgccgagaagtgcaaa
tacggcatggagatccccaccaacatccccgggctgggcgtgggcgtccccaccggcatg
ttcttcggctcggcccccagccccatgggggggatgtcgcccgccatgaccccctggaac
cagggggccaccccggcctacggagcctggtccccgagtgttggcagcggcatgaccccc
ggcgccgccggcttctcccccagcgccgcctccgatgccagcggcttcagcccgggttat
tccccggcgtggtcccccacccccggctcgcccggctccccgggcccctccagcccctac
gtcccatcgccaggtggggccatgtctcccagctactcgccgacgtcgccggcgtacgag
ccccgctcgcccggagggtacacgccccagagccccagctacagcccgacctccccctcg
tacagccccacgtccccctcctactctcccaccagccccaactacagcccgactagtccg
agctacagcccgacgtcgcctagctacagtcccaccagtccgagctacagcccgacgtcg
cccagctacagtcccaccagccccagctacagcccgacgtcgcctagctacagtcccacc
agtcctagctacagcccgacatcgcccagctacagtccgaccagtcctagctacagcccg
acatcgcccagctacagtcccaccagtcccagctacagcccaacatcgcctagttacagc
cccactagcccaagctacagcccgacctcacccagctacagtcccacctcgcccagctac
agcccaaccagccccaattacagcccgacttcccccaactacacccccaccagccccagc
tacagcccgacgtcgcccagctacagccccaccagccccaactacaccccgacctcgcca
aactacagccccacctctcccagctacagcccgacgagtcccagctacagcccgacgtct
ccgagctactcgccctccagcccccgctacaccccgcagtcgccaacctacacccccagt
tcgcccagctacagccccagcagccccagctacagcccgaccagccccaagtacaccccg
accagcccctcctacagccccagctcgcccgagtacaccccgacctcccccaagtacagc
cctacttctcccaagtacagcccgacctcccccaagtacagccccacctcgccgacctac
agccccacgacccccaagtacagccccacctcgccgacttactccccgacctcccccgtc
tacaccccgacctcccccaagtactacccgaacacccccacctacagccccacctccccc
aagtacagccccacctcccccacctacagccccacctcgcccaagggctcgacctactcc
ccgacctcgcccggctacagccccacctcgcccacctacagcctcaccagcccggccatc
agccccgacgacagcgacgaagacaactga
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integrated database retrieval system
