Mauremys reevesii (Reeves's turtle): 120383178
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Entry
120383178 CDS
T07797
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120383178 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120383178 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120383178 (CPSF4L)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120383178 (CPSF4L)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120383178 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-CCHC
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
120383178
NCBI-ProteinID:
XP_039356819
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All DBs
Position
LG15:complement(41411677..41420326)
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AA seq
317 aa
AA seq
DB search
MGGREFVAGPFFNPIPQLGLFSLPEAEGGGWPGSTLGPGLGWGYLPRPTGWEEMQELIAG
VEKLVFDLERDVEHQRGALLLPFPGMDKSGASVCEFFLRGLCAKGLMCPFRHISGEKTVV
CKHWLRGLCKRGDLCEFLHEYDMAKMPECYFYSKFGECSNRECPFLHIDPASRIKDCPWY
DRGFCKQGPLCKYKHTRRVMCVNYLAGFCPEGPKCKFMHPKADLMLCNSDLSQGLPPPSL
AVDGKSTHKQQVPAVLVLSHQPGARAAQCQRKKAQEAGGYPYGMLRPLGQVTCFKCGEKG
HYANKCSKSRLGIQLGK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggagggagggaatttgtagctggccccttcttcaatcccattcctcagctggggctc
ttcagcctgcctgaggcagaggggggaggctggcctggctccactctgggcccggggctt
ggctgggggtatctcccgcgtcccactggctgggaggagatgcaggaactcattgctggg
gtggagaagctcgtgtttgatttagagcgggatgtggagcaccagcgaggggccctgctc
ctgcccttcccaggcatggacaagtcaggggcgtccgtgtgtgagttcttcctccgagga
ctgtgtgcaaagggcctgatgtgtcctttccggcacatcagtggggagaagacggtggtg
tgtaagcactggctgcgggggctgtgcaagaggggagacctgtgcgagttcttgcacgag
tacgacatggccaagatgccggagtgttatttctactccaagtttggtgagtgcagcaat
agagagtgccccttcctgcacattgatcccgcatccagaattaaagactgtccctggtac
gacagagggttctgcaaacagggtcctctgtgtaaatacaaacacaccagaagggtgatg
tgtgtcaactacttagctggcttctgccccgaaggacccaaatgcaaattcatgcacccc
aaggcagacctgatgctgtgtaactcggatctctcccaggggctgccaccgccatccctg
gctgttgatggcaagagtactcacaagcagcaggtcccggcagtcctggtgctttctcat
cagcctggggctagggctgcccagtgccagaggaagaaggcacaggaggctggtggctac
ccctatggaatgctccggccccttgggcaggtcacatgcttcaagtgtggtgaaaagggt
cactatgccaacaaatgcagcaagagtcggctgggaatccaactggggaaatga
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