Mauremys reevesii (Reeves's turtle): 120385988
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Entry
120385988 CDS
T07797
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03082
ATP-dependent chromatin remodeling
mrv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120385988 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120385988 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mrv01009
]
120385988 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120385988 (SMARCB1)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120385988 (SMARCB1)
Protein phosphatases and associated proteins [BR:
mrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120385988 (SMARCB1)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120385988 (SMARCB1)
SWI/SNF complex
120385988 (SMARCB1)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120385988 (SMARCB1)
PBAF complex
120385988 (SMARCB1)
SWI/SNF complex
120385988 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
120385988
NCBI-ProteinID:
XP_039360575
LinkDB
All DBs
Position
LG18:19293986..19314129
Genome browser
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHESQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaaccttcgggcagaagcccgtcaagttccagctggag
gaggacggcgagttctacatgatcgggtccgaggtggggaactacctacgtatgtttcgt
ggctccctgtacaagaggtatccctccctctggaggcgactagccacagtagaagagagg
aagaaaatagttgcatcttcgcatgagtctcagcgaagtcacagccccagaagatatcac
ggttatacgacactagccactagtgtgactctcttgaaagcctctgaagtggaagagatc
ttggatggaaatgatgagaaatacaaggcagtgtctatcagcacagagcctcccacctac
ctcagagagcagaaggcaaaaaggaataatcagtgggtgccaaccctacccaacagctct
catcacctcgatgctgtgccatgctcaacaaccatcaacagaaaccgcatgggcagggat
aagaagagaaccttcccgctctgctttgatgaccatgacccagcagtaatccatgagaat
gcatcccagccagaggttctggttccaatccgattggacatggaaatcgatgggcagaaa
ctcagagatgcttttacatggaacatgaatgaaaagctaatgaccccagaaatgttctca
gagatactctgcgatgacctggatttgaatcctctgacctttgtccctgccattgcctct
gcaattcgacaacagattgagtcttatccaactgacagtatcctagaggaccagtcagat
caacgagttattattaagctaaatatccacgtggggaacatttccctggtagaccagttt
gaatgggacatgtcggagaaggagaactccccggagaagtttgcactgaagctgtgttca
gagcttgggctgggtggggaatttgtcaccaccatcgcttacagcattcggggacaactg
agctggcatcagaagacttatgccttcagtgagaaccctctgccaaccgtagagatcgcc
attcgcaacacaggtgatgctgaccagtggtgccctctgctcgaaaccctaacggacgcg
gagatggagaagaagatcagagaccaagacagaaacacaaggcgcatgagacgtttggcc
aacactgctccagcctggtaa
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integrated database retrieval system
