Mauremys reevesii (Reeves's turtle): 120388511
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Entry
120388511 CDS
T07797
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mrv01009
]
120388511 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120388511 (HDAC6)
04131 Membrane trafficking [BR:
mrv04131
]
120388511 (HDAC6)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120388511 (HDAC6)
Enzymes [BR:
mrv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120388511 (HDAC6)
Protein phosphatases and associated proteins [BR:
mrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120388511 (HDAC6)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120388511 (HDAC6)
Membrane trafficking [BR:
mrv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120388511 (HDAC6)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120388511 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
120388511
NCBI-ProteinID:
XP_039366292
LinkDB
All DBs
Position
LG22:complement(23890625..23907433)
Genome browser
AA seq
1023 aa
AA seq
DB search
MKRGGRRGPQPRRSPGLPETKRRGRAQRMNKDVEELESGLQRLDLTVEGAVPVGTGLAFD
ERLTEFHCLWDDSFPECPERLAAVKGKLLQCGLWERCVPVEARLATEEEILLAHSQEYVE
LMKSTEQMSEQELRALSETYDSVFLHPGSYRGARLAGGCVLRLLEKVQGGELRNGLALVR
PPGHHAHRDKMDGYCMFNHLAIGARYARQKLGVERVLIVDWDVHHGQGTQFLFEEDPSVL
YFSVHRYEQGRFWPHLPASDSPAVGQGRGEGFNINVPWNAVGMRDGDYLAAFLHVLLPVA
FEFHPQLVLVAAGFDSVLGDPKGEMAASAACFAHLTHLLMALAGGKVLLSLEGGYNLSSL
AEGVCAALRTLLGDPCPWLEPPVAPCRSALSSVSRTLAIHEKYWRSLRRAEANTPPEEVE
KEPAPMTPPGPPEVPRPLPAARTGLVYDERMTEHYNMWDSQHPELPQRVSRIFQRHGELR
LTERCRRIPARSAEEEELRMCHSPAYVQTVKATAGMKPRELHRQGDQYNSIYICASSYEC
ARLAAGSAFNAVQAVLEGEVQNAVAIVRPPGHHAESDTACGFCFFNSVALAARFAQRLAG
RPMRVMILDWDVHHGNGTQHMFEEDPSVLYVSLHRYDHGSFFPTSEDADADRVGEGPGRG
FTLNVPWNGPRMGDAEYLAAFHRLVLPVAYQFAPELVLVSAGFDAARGDPLGGCLVSPEG
YAHMTHLLLGLAGGRVVLVLEGGYNLVSISESMAMCTRTLLGDPLPELGSLRAPHPSALQ
SLARASAEHRRYWACLRLDVPIREDSRPRSGQPGPVREDSPPEDPPGGSQSPPVDDILRL
GALCLSDEAGADSGSPQLSPDSALVGGASPGGAEPPAAEESEDPPSLLDEAAALLPSPSI
SLGVEFADMGTLYAVTPLPWCPHVESLQSLPPAGLDALAPCEECGSQGENWVCLACYRVL
CGRYVNQHMLAHGSVSGHPLVLSYADLSVWCYTCQSYVHHPTLLPAKTLAHRMKFGEDPA
AGL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggtggccggaggggcccccagccccgtcgcagccccgggctccccgaaacc
aaacgccgcggccgagcccagaggatgaacaaagatgtggaggagctggaatcggggctg
cagcgcctggatctgactgtggagggggcagtgcccgtggggacgggtctggcctttgac
gagcggctcacggagttccattgcctgtgggacgacagcttccccgagtgcccagagaga
ctcgcagccgtcaagggaaagttgctgcaatgcggcctatgggagcgctgtgtcccggtg
gaggcccggctggctaccgaggaagagattctgctagcccacagccaggagtacgtggag
ctgatgaagtcgacggagcagatgagtgagcaggagctcagggccctgtcagagacgtac
gactccgtcttcctgcacccgggttcgtaccgtggcgcccggctggctggcggctgcgtc
ctgcggctgctggagaaggtgcagggcggggagctgcgcaacgggctggcgctggtccgg
ccaccaggacaccacgcccaccgagataagatggatggttactgcatgttcaaccacctg
gccatcggggccagatacgcccggcaaaagctgggagtggaacgagtcctgatcgtcgac
tgggacgttcaccatgggcagggcacccagttcctcttcgaggaggatcccagtgttctc
tatttctccgtccatcgctacgagcaggggaggttctggccccacctgccggcgtccgac
agccccgccgtggggcaggggcgtggagagggattcaatatcaacgtgccatggaacgca
gtgggaatgagggacggggattatctcgctgcctttttacacgtcttactgccagtggcc
tttgagttccatccccagctggttctggtggccgccgggtttgactctgtgctcggggac
cccaagggcgagatggcggcgtcggccgcctgcttcgctcacctgactcatctgctgatg
gccctggcggggggcaaggtgctgctgtctttggagggtggctacaatctgagctccctg
gccgagggggtctgtgcggccctgaggaccctcctgggggacccctgtccctggctggag
ccgcccgttgccccctgtcgcagcgctctgagctccgtgtccaggacgctcgcgatccac
gagaaatactggcggagcctgcgcagagcggaggccaacacccccccagaggaggtggaa
aaggagccagcccccatgacccccccaggtccccctgaggtgccgcgacccctcccagct
gcccgcaccggcctggtgtatgacgaacgcatgacggagcattacaacatgtgggacagc
cagcacccggagctgccgcagcgggtctcccgcatcttccagcgccacggggagctgcgg
ctcacggagcgatgccgccgcatcccggcccgcagtgctgaggaagaggagctgagaatg
tgccacagcccggcgtacgtgcagacggtgaaggccacggctggcatgaagccgcgggag
ctgcaccgccagggggaccagtacaactccatctacatctgcgccagctcctacgagtgc
gcccggctggcggccggctccgccttcaacgccgtgcaagccgtgctggagggcgaggtg
cagaacgccgtggccattgtccggcctcccgggcatcacgccgagtccgacacggcctgt
ggcttctgcttcttcaattcggtagccctggcagctcgtttcgcgcagcgcctggcggga
cggcccatgagggtgatgatcctggactgggatgttcatcacggcaacggtacccagcac
atgtttgaggaggatccgagcgtgctgtacgtctctctgcaccgctacgaccacggctcc
ttcttccccacctccgaggacgccgacgccgaccgggtgggggaggggccgggccgcggc
ttcaccctcaacgtgccctggaacggcccccgcatgggcgacgccgagtacctggccgcc
ttccaccgcctggtgctgcccgtcgcctaccagttcgccccggagctggtgctggtgtcg
gccgggttcgatgccgcccgcggggacccgctggggggctgcctggtgagccccgagggt
tacgcccacatgacccacctcctgctggggctggcagggggccgggtcgtcctggtattg
gagggaggctacaacctggtgtcgatctccgaatccatggccatgtgcacccggaccctg
ctgggggacccgctgcccgagctggggagcctgcgagctccccaccccagcgccctgcag
tcgctggcccgggcgagcgccgagcaccgcaggtactgggcctgcctgcgactggatgtg
ccgatccgggaggactcgaggccccgatccgggcagccgggccccgtccgggaggactcc
ccaccagaggatcccccaggggggtcccagagccccccggtcgacgacatcctgaggctg
ggagctctctgcctcagcgacgaggcgggggccgactcaggctccccacagctgagccct
gactccgccctggtgggcggggcttcccctggaggggcggagcctccagctgcagaggag
tcagaggacccccccagcctcctggacgaagcagctgccctgctcccctccccctccatc
agcctgggggtggagttcgcagacatggggacgctctacgccgtcacccctctgccttgg
tgcccccacgtggagtcgctccagtcccttcccccggccgggctggacgcgctggcgccg
tgtgaggaatgcggcagccagggcgagaactgggtctgcctggcctgttaccgggtgctc
tgcggtcgttacgtcaatcagcacatgctggctcacggctccgtttccggccaccccctg
gtgctgagttacgccgacctctcggtctggtgctacacctgtcaatcatacgtccatcac
ccgaccctgctgccagccaagaccctggctcaccgcatgaagttcggggaggacccggcc
gctgggctctga
DBGET
integrated database retrieval system
