Mauremys reevesii (Reeves's turtle): 120390937
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Entry
120390937 CDS
T07797
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120390937 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120390937 (XAB2)
03041 Spliceosome [BR:
mrv03041
]
120390937 (XAB2)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120390937 (XAB2)
Spliceosome [BR:
mrv03041
]
Complex B
Other components
Prp19-related factors
120390937 (XAB2)
Complex C
120390937 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_16
RPN7
TPR_1
LTN1_E3_ligase_6th
NRDE-2
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
120390937
NCBI-ProteinID:
XP_039369962
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All DBs
Position
LG25:complement(3193567..3209257)
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AA seq
858 aa
AA seq
DB search
MPELEETPVAAGEGKPDLFFEEEDLQYEEEILRNPFSVKCWIRYIEFKQNAPRHVLNLIY
ERALKELPGSYKLWYNYLKQRRKQVKNRCVTDSGYEEVNNCHERALVFMHKMPRIWLDYC
QFLMDQCRITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSP
ENAEEYIEYLRSIDRLDEAALRLATVVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKS
LNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFD
SYAQFEESMIAAKMETTSELGQEEEDDVDLELRLARFEQLITRRPLLLNSVLLRQNPHNV
HEWHKRVKLYEGKPREIINTYTEAVQTVDPFKATGKTHTLWVSFAKFYEDNGQIEDARTI
FEKATKVNFKQVDDLACVWCEYGEMELRHENYDQALRILRKATAIPAKKAEYFDASEPVQ
NRVYKSLKVWSMLADLEESLGTFKSTKAVYDRILDLRIATPQIIINYALFLEEHTYFEES
FKAYERGISLFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPQKYAKTIYL
LYAKLEEEFGLARHAMAVYERATRAVQPSEQYEMYNIYIKRAAEIYGVTHTRSIYEKAIE
VLSDEHAREMCQRFADMECKLGEIDRARAIYSYCSQICDPRTTGSFWQTWKDFEIRHGNE
DTIREMLRIKRSVQATYNTQVNFMASQMLKVSSNATGTVSDLAPGQSGMDDMKLLEQRAE
QLAAEAERDKPRAKEKILFVRSDASRSELAALSRQANPDEIDIDEEEEGGESEENEPDEV
QLEQQSVPSAVFGGLKTD
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctggaggagacgccggtggcggccggcgaggggaagccggacctgttcttc
gaggaggaggatctgcagtacgaggaagaaatcctgcgcaaccccttttctgtcaagtgc
tggatccgctacattgagttcaagcagaacgccccccggcatgtgctgaacctgatctac
gagagagccctcaaggagctgccaggcagttacaagctgtggtacaactaccttaagcag
cgccggaagcaggtgaagaacaggtgtgtgactgactccggctatgaggaggtgaacaac
tgccatgaacgtgccctcgtcttcatgcacaagatgcctcggatctggctagattactgc
cagttcctcatggaccagtgccggatcacccgcacacgcaggacctttgaccgggcactc
cgggcgctgcccatcacacagcaccatcgcatctggcccctctacctgaagtttgtgcgc
ttgtaccccctgcccgagacggctgtgcgagtctaccgcagatacctgaagctgagcccc
gagaacgccgaggagtacattgaatacctgcgctccattgaccggctggatgaggctgcc
ctccgccttgccactgtggtcaatgacgagaggttcgtctcaaaggaggggaaatccaac
taccagctgtggcacgagctatgtgacctcatctcccagaaccctgacaaggtgaagtcc
ctcaatgttggggccatcattcgtggaggcctgacccgcttcactgaccagctgggcaag
ctctggtgctccctggccgactactacatccgcagcgggcactttgagaaggcccgggac
gtgtacgaggaggccatccagacggtgatgacggtgcgggatttcacccaggtgtttgac
agctatgcccagttcgaggagagcatgattgcagccaagatggagaccacctctgagctg
gggcaggaggaggaggatgacgtggacctggagctgcgcctggctcgctttgagcagctg
atcacacggcgccccctgctgctcaacagcgtgctgctgcgccagaacccccacaacgtc
cacgagtggcacaagcgcgtgaagctctacgagggcaaaccccgagagatcatcaacacc
tacacagaggccgtgcagaccgtggaccccttcaaggccaccggcaagacacacacactc
tgggtctccttcgccaagttctacgaggacaatgggcagatcgaggatgccaggaccatc
tttgagaaagccaccaaggtgaacttcaagcaggtggacgacctggcctgcgtgtggtgc
gagtacggggagatggagctgcgccatgagaactatgaccaggccctgcgcatcctccgg
aaagccacagccatcccagccaagaaagccgagtacttcgatgcctcggagcccgtccag
aaccgtgtgtacaagtccctcaaggtctggtccatgctggctgacctggaagagagcctg
ggcaccttcaagtccaccaaggcggtgtacgaccgcatcctggacctgcgcatcgccacg
ccccagatcatcatcaactacgccctcttcctggaggagcacacctacttcgaggagagc
ttcaaggcctacgagaggggcatttccctgttccgctggcccaacgtgtacgacatttgg
aacacctacctgaccaagttcatcgaccgctatggcggcaagaagctggagcgcgcccgc
gacctcttcgagcaggcgctggacggctgcccccagaaatatgccaagaccatctacctg
ttgtatgccaagctggaggaggagttcgggctggcgcggcatgccatggcggtgtatgag
cgggccacgcgggctgtgcagccctcagagcagtacgagatgtacaacatctacatcaag
cgggcggcggagatctacggggtcacccacacccgcagcatctatgagaaggccattgag
gtgctgtcagacgagcacgcccgcgagatgtgccagcgctttgccgacatggaatgcaag
ctgggcgagatcgaccgggcccgggccatctactcctactgctcgcagatctgtgacccc
cggaccacaggctccttctggcagacgtggaaggactttgagatccggcacgggaacgaa
gacacgatccgggagatgctgcgcatcaaacgcagtgtccaggccacctacaacacccag
gtcaacttcatggcctcgcagatgctcaaagtctccagcaatgccacgggcaccgtgtca
gacctggctccggggcagagtggcatggacgacatgaagctgctagagcagcgggcagag
cagctggcggctgaggcagagcgggacaaaccccgggccaaggagaagatcctctttgtc
aggagcgatgcgtcacgcagtgagctggctgcactctccaggcaggcgaaccctgacgag
atcgacattgatgaggaggaggagggtggtgagagcgaggagaatgagcctgatgaggtg
cagctggagcagcagagcgtcccctcggctgtgtttggggggctgaagaccgactga
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