Mauremys reevesii (Reeves's turtle): 120391021
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Entry
120391021 CDS
T07797
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120391021 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120391021 (SMARCA4)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120391021 (SMARCA4)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120391021 (SMARCA4)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120391021 (SMARCA4)
Chromatin remodeling factors
BAF complex
120391021 (SMARCA4)
PBAF complex
120391021 (SMARCA4)
GBAF(ncBAF) complex
120391021 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
120391021
NCBI-ProteinID:
XP_039370156
LinkDB
All DBs
Position
LG25:complement(11853555..11910024)
Genome browser
AA seq
1646 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHTIPPQG
SGGYAQDNMHQMHKPMDSMHEKGISDDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGSQMSSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGAGPGPGP
GPAPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGAPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLDTWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYST
GSGSGSASFPHTASTLCLNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDR
RREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSL
TEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDVDVGSATPTTSTRSRDKDDDSKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEEDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSR
AKPVVSDDDSEEEQEEDRSGSGTEDD
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagatcctccaatgggaggaactcctcgtccagggccttctcctggaccc
ggcccatcacctggtgcaatgttgggccccagtcctggaccctcgcctggctctgcacat
agtatgatgggacccagccctggaccaccttcagcaggacacactataccacctcagggg
tctgggggctatgctcaggacaatatgcatcagatgcacaagccaatggattccatgcat
gagaagggaatatctgatgatcctcggtacggccagatgaaggggatgggaatgaggcca
ggtgggcacacagggatgggtcctcctccaagcccaatggatcagcattctcaaggttac
ccttctccgctcggtggttctgagcatgcctcaagcccagttccagctaacggtccatcc
tctggctctcaaatgtcgtctggtcctggaggagtcccgttagacgggactgacccacag
gcattaggacaacagaaccggggcccaaccccttttaaccagaaccagctgcaccagtta
agagctcagatcatggcctataagatgcttgccagagggcagcctttacctgaccatctt
cagatggcagtgcagggaaagagaccaatgcctggaatgcagcagcaaatgccgacgcta
cctccaccctctgtatctggtacaggaccagtacaaggagcagggcctgggcctggacca
ggaccagcacctccaaattacaacagacctcatggtataggagggcctaatatgcctcct
cctggaccctcaggagttcccccaggaatgcctgggcagccccctggtgcacccccaaag
ccctggcctgaaggaccaatggcaaatgctgcagcccccactagcacacctcagaaactg
attcctcctcagccaactggccgtccttcaccagcacccccggcggtacctcctgcagca
tctcctgtaatgccaccccaaactcagtcacccgggcagccagcccagcctgcccctatg
gtgcagctccatcagaagcagaatcgtatcacgccgatccagaagccaagaggacttgac
ccagtggaaatccttcaggagagggaatacagattgcaggctcgcattgctcacagaatc
caagaactagaaaacctgccggggtccctggctggtgacctgagaaccaaagctaccatt
gaacttaaagcactaagactgcttaacttccagagacagctgcgtcaggaagtcgtggtg
tgcatgagacgagacactgccctggaaacggcactgaatgccaaggcatacaaacgcagc
aagcggcagtccctgcgcgaggctcgcatcacagagaaactggagaaacaacagaagatt
gagcaagaacggaaacgcagacaaaagcaccaggaatacctcaatagcattctccagcat
gccaaggatttcaaagaataccatcgatccgtcacgggcaaaattcaaaagcttacgaaa
gctgtggccacttaccatgctaacactgagcgtgagcagaagaaagagaatgagaggatc
gagaaagagcgaatgcgcaggctgatggctgaggatgaagaagggtaccggaagcttatc
gatcagaagaaagataagcgcttggcatatctactccagcagacagacgagtatgtggcc
aacctgactgaactggtgcgacaacataaggctgcacaggtggcaaaggagaaaaagaag
aaaaagaaaaagaagaaggcagagaatgcagaagggcaaactcctgcaattggaccggat
ggcgaacctctggatgagaccagccaaatgagtgatctccctgtgaaagtgatccacgtg
gaaagtggtaaaatccttactggcacagatgctccaaaggctggacagctggacacctgg
ttggaaatgaacccaggatatgaagtagctcccagatctgacagtgaagaaagtgggtcg
gaggaggaggaagaggaggaggaagaggagcagccgcaacctgctcagcctgccctgcct
gtggaagaaaagaagaagatcccagatccagacagtgatgatgtgtcagaagtcgatgcc
aggcacattattgaaaatgctaagcaagatgttgatgatgagtatggggtctcccaagct
ctggcgaggggattacaatcttactacgctgtggcccacgcggtcactgaacgagtggac
aaacagtccacgctcatggtcaatggcgtcctcaaacaataccagattaaaggcttggag
tggctcgtctctttgtacaataataacctgaatggtatcctggcagatgagatgggtctg
ggcaaaacgatccagaccatcgctttaatcacatacctcatggagcacaagcgtatcaat
ggacccttcctcattatcgtacctctctcaacgttgtcaaactgggcatatgaatttgat
aaatgggctccttctgtggtgaaggtctcatacaagggctctccagcagcaagacgggca
tttgtacctcagcttcgaagtgggaagtttaatgtcttgctcacaacctacgagtacatc
atcaaagataagcacattcttgccaagattcgctggaagtacatgattgttgatgaaggt
cacagaatgaagaatcaccactgtaagctaacccaagtcctcaacacacactacgtagct
ccgcgtcgtttgctgctgacaggaactccactacagaataagctgccagagctgtgggct
ctactcaatttcctccttcccaccatcttcaagagctgtagcacatttgagcagtggttt
aatgctccatttgccatgactggagagaaggtggatttgaatgaagaagaaactattctg
attatccgtcgtttgcacaaagtgctgcgtcccttcctgctaagacggttaaagaaggag
gtagaagcacagctgcctgaaaaggtggagtatgtgatcaagtgtgacatgtcggcacta
cagagggtgctgtacagacacatgcaggccaagggagtgctgctcaccgatggctcggag
aaggataaaaagggcaaaggtggtacaaaaaccctgatgaacaccatcatgcagctgagg
aagatctgtaaccatccgtacatgtttcaacacatagaggaatccttttcagagcactta
ggtttcactggcggtattgtacagggactagacctgtaccgagcatctggcaaatttgag
ctcctagaccggattcttcccaaactacgagccaccaaccacaaggtgctgctgttctgt
cagatgacctcgctcatgaccatcatggaagactactttgcataccgtggcttcaaatac
ctcaggctggatggaaccactaaagctgaagaccgcggcatgttgctgaagaccttcaac
gagcccggctctgaatatttcattttcctgctgagcactcgagccggagggctgggactg
aacttacagtctgcagatactgtgattatttttgacagtgactggaatccgcaccaggat
ttgcaggcccaggaccgagcgcaccgtattgggcaacagaacgaggtgcgtgtgctccgc
ctctgcaccgtgaacagcgtggaggagaagatcctggctgcagccaagtacaaactgaat
gttgatcagaaggtcatccaggccggcatgttcgaccagaaatcctccagccacgagcgg
agagctttcctccaggctatcctagagcacgaggagcaggatgagaacagatacagcacg
ggcagcggcagtggcagtgcaagcttcccccacactgcctcaaccctgtgcctgaaccct
gacttggaggaaccacctctaaaggaagaagatgaagttcctgacgatgaaacggtcaac
cagatgattgcccgtcatgaagaggaatttgacctttttatgcgcatggacctggaccgc
aggcgggaggaagcacgcaatccaaagcgaaagccacgtctaatggaagaagacgagctg
ccatcctggattattaaggatgatgctgaagtggagagactcacgtgtgaggaggaggag
gagaagatgtttgggcgaggatcacgtcaccgtaaggaggtggactacagtgactcgctt
accgagaagcagtggctcaaggtatacatggctatagaggagggcacgctggaggagatc
gaggaggaggttcgtcagaagaaatcttcccgcaaacgcaagcgagatgttgatgtcggc
tctgccaccccgactaccagcacccgcagccgggacaaagacgatgatagcaaaaagcag
aaaaagcgcggcaggcctcccgccgaaaagctctccccaaacccccccaacctcaccaaa
aaaatgaagaagatagtggatgccgtgattaaatacaaggacagtagtagtggacgccag
cttagcgaagtcttcatccagttgccttctcgcaaagagctcccggagtactatgagctc
attcgcaagccagtggatttcaaaaaaataaaggaacgcatccgcaaccacaagtaccgc
agcctgaatgatctggagaaggacgtcatgctgctgtgtcagaacgcacaaacctttaat
ctggaaggctctctgatctacgaagattcgatagtgctgcaatccgtcttcaccagcgtg
aggcagaaaattgagaaagaggaagacagtgaaggtgaggagagtgaggaggaggaggaa
ggagaagaggaaggatctgaatcagagtctcgctccgtcaaggtgaagatcaagctgggc
agaaaggagaaagcacaagaccggctgaagggtcgcaggcgcaccagccgcggctcccgg
gccaagccagtggttagtgatgacgatagtgaagaggagcaggaggaggatcgctcagga
agtggcaccgaagatgattaa
DBGET
integrated database retrieval system
