Mauremys reevesii (Reeves's turtle): 120391131 Help Entry 120391131         CDS       T07797                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism mrv  Mauremys reevesii (Reeves's turtle) Pathway mrv04510   Focal adhesion mrv04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:mrv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120391131 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120391131 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mrv00536]     120391131 (COL2A1) Glycosaminoglycan binding proteins [BR:mrv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120391131 (COL2A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  120391131 NCBI-ProteinID:  XP_039370440 LinkDB All DBs Position LG25:19443650..19509943 Genome browser AA seq 1490 aa AA seqDB search MISFVASRTVVLLAATLLLLLAVVRCQDGDIQEAGSCVQDGQRYSDKDVWKPEPCRICVC DTGNILCDEIICEEMRDCPSPEIPFGECCPICPTDQPAVSGQPGPKGQKGEPGDIKDVVG PRGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGG NFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGTSG PMGPRGPPGPPGKPGDDGESGKPGKSGERGSPGPQGARGFPGTPGLPGVKGHRGYPGLDG SKGEAGAAGAKGEAGSPGENGSPGPMGPRGLPGERGRPGSSGAAGARGNDGLPGPAGPPG PVGPSGTPGFPGGPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGAPGNPGTDGIPG AKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGIAGFKGEQGPKGESGPAG PQGAPGPAGEEGKRGGRGEPGGAGPIGPPGERGSPGNRGFPGQDGLAGPKGAPGERGPAG LGGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGAQGARG QPGVMGFPGPKGANGEAGKAGEKGLPGAPGLRGLPGKDGETGASGPPGPAGPAGERGEQG SPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGTPGLVGPRGERGFPGERGSPGSQGLQG SRGLPGTPGTDGPKGATGPSGPTGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEG APGKDGGRGLTGPIGPPGPSGANGEKGESGPPGPSGAAGARGAPGDRGETGAPGPAGFAG PPGADGQPGAKGEQGESGQKGDAGAPGPQGSSGAPGPQGPTGVTGPKGARGAQGPPGTTG FPGAAGRVGPPGPNGNPGPPGPPGASGKDGPKGARGDGGPVGRAGDPGLQGPAGPPGEKG ESGEDGPPGADGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGAGDRG PPGPVGPPGLTGPSGEPGREGTPGSDGPPGRDGAAGVKGDRGETGAVGSPGAPGAPGSPG PVGPTGKQGDRGESGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTG LQGLPGPPGPSGDQGATGPSGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGETG PAGPPGNTGPPGPPGPPGPGIDMSAFAGLGQVEKGPDPMRYMRADQASSDLRQHDVEVDA TLKSLNNQIESIRSPEGSKKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNM ETGETCVYPNPSSIPKKNWWTSKTKEKKHIWFGETINGGFHFSYGDDNLAPNTANIQMTF LRLLSTEGSQNITYHCKNSIAYMDEASGNLKKAILIQGSNDVEIRAEGNSRFTYSALVDG CTKHTGKWGKTVIEYRSQKTSRLPIIDVAPMDIGGADQEFGVDIGPVCFL NT seq 4473 nt NT seq  +upstreamnt  +downstreamnt atgatcagctttgtggcttcaaggactgtagtgctgctcgcagccaccctgctcctttta ctagccgttgtcagatgtcaggatggggatatccaggaggcaggcagctgtgtgcaggat gggcagaggtatagtgataaggatgtgtggaaacccgagccctgccggatctgtgtctgt gacactgggaatatcctctgcgacgagataatctgcgaagaaatgagagactgtcccagc cccgagatccccttcggagaatgctgccctatctgcccaactgaccaacctgctgtcagc ggacaacctggccccaagggacaaaaaggggaacccggtgatattaaagatgtcgtagga ccaagaggaccacctggaccacagggacctgcaggggaacaaggaccacggggcgaccgt ggggataaaggagaaaaaggtgctcctggccctcggggtagagatggcgaacctggtacc cctggaaaccccggacccccagggcccccgggtcccccagggcctcctgggcttggcgga aactttgctgctcagatggcgggaggatttgatgagaaggctggtggtgctcagctgggc gtgatgcagggacctatgggacctatgggaccgcgaggacctccaggaccatcgggagct cctggccctcaaggatttcaaggcaaccctggagagcctggggaacctggaacttctggt ccaatgggtccccgagggcctcccggaccacctggaaaacccggcgatgacggcgaatca ggcaaacccggcaaatctggtgaacgtggatcccctggcccgcagggtgcgcgaggcttc ccaggaaccccaggtctcccaggagtcaaaggtcacagaggttaccctgggttagacggc tccaaaggagaagcaggagctgcaggggctaagggtgaagctggatcaccgggtgagaat ggttctcctggtcccatggggccccgtggtctcccaggcgaaagaggacgtcccggctca tccggtgctgctggtgctcgtggcaacgacggtctccctggccccgccggcccccctgga cccgtcggcccctccggaactcctggattccctggcggcccaggctctaagggggaagct ggccccactggtgctcgaggccctgagggtgcccaaggccccagaggtgaatctggcact cccggctcccccggaccttcaggggcacccggtaaccctggaactgacggcatccctggt gctaaaggatcagctggcgctcctggaattgctggtgcccccggcttccctgggccacgt gggcctcccgggcctcaaggtgcaaccgggcctctgggtcccaaaggtcagacgggagac cctggcattgcaggcttcaaaggcgaacaaggccccaaaggtgaatctggccccgcaggg ccacagggagcccccggcccagctggcgaagaaggcaagagaggtggccgtggtgagccc ggtggagctgggcctatcggaccccctggagagagaggctctcctggaaaccgcggcttc ccaggtcaggatggtctcgctgggcccaagggtgcccctggcgagcgtggtcccgctggc cttggggggccgaaaggagccactggtgatcctggacggcctggagaacctggcctgccc ggcgctaggggtctcactgggcgccctggtgatgctggtcctcaaggcaaagtcggtccg agtggtgcccctggtgaggatggtcgcccgggcccaccgggcgcacaaggtgctcgtggg cagcctggcgtcatgggtttcccaggcccaaaaggtgctaacggcgaggctggtaaagct ggagagaagggattgcccggcgcccctggtctgagaggtcttcctggcaaagatggtgag acaggagcttctggtccccccggacctgccgggcctgctggcgagaggggtgaacagggc tcgccaggtccttccggcttccagggactccccggccccccaggtcctccaggcgaaggt ggcaagccaggagatcagggcgtccctggcgaagctggcaccccaggccttgtgggtcct cgaggtgaacgtggcttcccgggtgaacgtggctctccaggttcacaaggtctgcagggc tctcgagggctccctggaactcctggtactgatggacccaagggtgcgactggtccatcc ggccctactggtgcccaaggtcccccgggtctgcaggggatgcccggtgagaggggagca gctggtatttccggaccaaagggagacaggggtgatgtcggtgagaaaggcccagaagga gctcctggcaaggacggcggaaggggtttgacaggtccgatcggtccccctggcccttct ggcgccaacggcgagaagggtgaatcgggtcccccaggcccatctggtgctgccggtgcc cgcggcgccccgggtgatcgtggcgagactggagcccctggccctgctggatttgctgga cctcccggcgctgacggccaacccggcgctaaaggtgaacaaggagaatctggccagaag ggagacgccggggccccggggccacagggttcttccggtgctcctggcccacagggtccc actggtgtgactggtcctaagggagctcgaggtgcacagggaccccctggaaccaccgga ttccccggcgctgcaggacgtgtcggccctcccggccctaacggtaacccaggtccacct ggcccaccaggtgcttctggcaaagatggtcccaagggcgctcgtggtgatgggggccca gtgggccgtgctggtgaccctggtctccaaggccctgccggtccacctggtgagaaggga gagtccggggaagatggcccacctggtgccgatgggccacccggtcctcaaggtttgtca ggccagcgaggtattgtcggtcttcccggccagcgtggtgagagaggtttcccggggctg ccaggtccctccggtgagcctggcaaacaaggagcccctggaggtgccggcgaccgaggg ccacccggtcctgtgggtcccccaggtctgactggtccctctggtgaacctgggcgcgag ggcacccccggatctgatggcccccctggcagagatggggcagctggagtgaagggtgat cgcggtgagactggtgctgtcggttctcctggtgctcctggcgctcctggctccccgggt cctgttggtccaactggcaaacaaggagacagaggagaatctggcgctcaaggccccatg ggtccctctggccccgcaggcgcacgcggcatgccgggtcctcaaggtcctcgcggtgac aagggcgaagctggagaggctggcgagagaggtctgaagggtcaccgaggattcactggt ctgcagggtcttcctggacctcccggtccatctggagatcaaggtgctactggtccttct ggtccttctggtcccaggggtcccccaggccctgttggtccctctggcaaagatggttca aatggcatgcccggtccgattggtcctccaggtcctcgtggtcgtagtggcgaaactgga cctgctggtccccctggaaacactggaccccctggacctcccggccccccaggccccggc attgacatgtcggccttcgccggtttgggccaggttgagaaaggccctgaccctatgcgc tacatgcgagctgaccaggcctctagcgacctgcgccagcatgatgtcgaggtcgacgcc actctgaaatccctcaacaaccagatcgaaagcatccgcagccccgagggctccaagaag aacccagcccggacctgccgtgaccttaaactctgccaccccgagtggaagagtggtgac tactggatcgaccctaaccagggctgtaccttggatgccattaaggttttctgtaacatg gagactggcgagacatgcgtctatcccaacccctccagcattcccaagaagaactggtgg accagcaagaccaaggagaagaagcatatctggtttggagagaccatcaatggtggattc cactttagctatggagatgacaacctggcccctaacacggccaacatccagatgaccttc ctgcgcctcctgtccaccgaaggctcccagaacatcacctaccactgcaagaacagcatc gcctatatggacgaggcttccgggaacctgaagaaagccatcctgatacagggatccaat gacgtcgagatcagagccgagggcaacagcagattcacatacagtgccttggtggatggc tgcacgaaacacactggcaaatggggcaagacagtcattgaataccgatcacagaagacc tcgcgcctgcccatcatcgatgttgcacctatggacattggtggagccgatcaggagttt ggcgttgacattgggccagtctgctttttgtaa

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