Mauremys reevesii (Reeves's turtle): 120391178
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Entry
120391178 CDS
T07797
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120391178 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120391178 (SMARCC2)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120391178 (SMARCC2)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120391178 (SMARCC2)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120391178 (SMARCC2)
PBAF complex
120391178 (SMARCC2)
GBAF(ncBAF) complex
120391178 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_2
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
120391178
NCBI-ProteinID:
XP_039370544
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All DBs
Position
LG25:complement(16026149..16048507)
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AA seq
1184 aa
AA seq
DB search
MNPSRMDRNVEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLGKLKDIIKRHQGTVTEDR
NNASHVVCPVPSNLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEASVEDAPTP
EKPRKVHAKWILDTDTFNEWMNEEDYEVTDEKSLVSRRKKISAKTLTDEVNSPDSDRRDK
KGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN
VEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENSAGNKGEQAKNPD
LHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMID
TYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHF
HVLADTPSGLVPLQPKTPQGRQSDSDTKAGRKSKEIEDLVPEAAKAKPELQTSASQQMLS
FPDKGKEKPTDLQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDW
NKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFL
ASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGI
AGTTSDEPERIGEGGERGSFRALAREAPAISPPSDAAPCAASRKGNERRGEEPQETRAGL
ASGLELTLNRLAQEESGADEPRADAQPVEEKKELKEPREGGAEEEAKEKLGEAPKKEEEK
GKEGDSEKELEKGDGDSMAEKEKEPKDGQEEVLKDLAEAEGERKTKVERDIGEGNLSTAA
AAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEY
QRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPPPLPPGSQPIPSSGAPLAP
AAHSMPVAQAPGAPTTASLVAQPSLAQTEQLGQAVPATPGAPHTVPAQQGQTPAGPHAQP
PFPGQQPSSQMLPGTVGVSCHPGVPGNLPAAPPFGIPPSIPFSMASNVADSISINLPANT
PAHPMHGNLPCGMLAGGALAPPNLPVTVSSAMHPSMLTTNGPPLAAPALPHVSGLASAAA
QSPAIVAAMQGSLLPNAALAPDQGPPLQTDPIAPSTATPVPPTQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttcgcggatggatcgcaacgtggaaatgttcatgaccatcgagaaatccttg
gtgcagaacaactgcctggcccggcctaacatcttcctgcaccaggagatcgaacccaag
ctgctcggcaagctgaaggacattatcaagcggcaccaggggacggtcaccgaggatcgg
aacaacgcctcccatgtcgtctgcccggtccccagcaacctagaggaggaagaatgggtt
cgacctgtcatgaagagagacaagcaggtccttctgcactggggctacttcccggacagc
tacgacacctggatccctgcgagtgaaatcgaagcttctgtcgaggacgcacccaccccg
gagaagccccggaaggtccatgccaagtggatcctcgacacggacaccttcaacgagtgg
atgaacgaggaggactacgaggtgaccgacgagaagagcctcgtctcccgcaggaagaaa
atctcagccaaaacgctcactgacgaagtgaacagccccgactcggaccggcgcgacaag
aagggtgggaactacaaaaagagaaagcgctcaccctcgccgtccccgaccccagaggcc
aagaagaagaacgccaagaaaggcccgtcgaccccgtacaccaagtccaagcgggggcac
cgcgaggaggagcaggaggacctgacgaaggacatggacgagccctcccccgtccccaac
gtggaggaggtcacgctgcccaaaacagtgaacaccaagaaggactcggagtctgcaccc
gtgaaggggggcaccatgaccgacctggacgagcaggaggatgagagcatggagaccgcc
ggcaaggatgaggaggaaaacagtgcggggaacaaaggggagcaggccaagaacccggac
ctgcacgaggacaatgtgacggagcagactcaccatattatcatccccagctacgccgct
tggttcgactacaacagcgtccacgccattgagcgcagagccctgcccgagttcttcaac
ggcaagaacaaatccaagacccccgaaatatacctggcttatcgcaacttcatgattgac
acctaccggctgaacccccaggagtacctgacctccaccgcctgccgccggaacctggcc
ggggacgtctgcgccatcatgcgggtccacgccttcctggagcagtgggggctgatcaac
taccaggtggatgcggagagccggccaacccctatgggacctccccctacgtcgcatttc
catgtcctggccgacaccccctcggggctggtgccgctgcagcccaagacgccccagggt
cgccagagcgacagcgacacaaaggccggccgcaagagcaaagaaattgaggacctggtc
ccggaggcggcgaaggcgaagcccgagctgcagacctcggcctcccagcagatgctcagc
ttccccgacaagggcaaggagaagccgacggacctgcagaacttcggcctgcgcacggac
atgtacaccaaaaagaacgtcccttctaagagcaaagccgccgccagcgccactcgggag
tggacggagcaggagacgctgctgctgctggaggccctggagatgtacaaggacgactgg
aacaaggtgtcggagcacgtgggcagccgcacccaggacgagtgtatcctccacttcctg
cgcctgcccatcgaggacccctacctggaggactcggaggcgtcgctcgggcccctggcc
taccagcccatccccttcagccagtcgggcaaccccgtcatgagcaccgtggccttcctg
gcatccgtcgtggacccccgcgtggcctccgcggcggccaagtccgctctcgaggagttc
tccaagatgaaggaggaggtgcccacggcgctggtggaagctcacgtccgcaaggtggag
gaggcggccaaggttacgggcaaggccgacccggccttcgggctggagagcagcgggatc
gcggggaccacgtccgacgagccggagagaataggtgaggggggcgagcgaggctccttc
cgcgccttggcccgtgaggcgcccgccatctcgcctccgtcggacgctgctccgtgcgcg
gcgagtaggaagggtaatgaacgaagaggggaggagccacaggagaccagagctggcctg
gcctccggtctggagctcaccctcaatcggctggctcaggaggagagcggcgctgacgag
ccgcgggccgacgctcagccggtggaagagaagaaggagctgaaggagccccgggaagga
ggcgcggaggaggaagcgaaggagaagctgggcgaagcacccaagaaagaggaggagaaa
ggcaaggagggggacagcgagaaggagttggagaagggcgacggtgacagcatggccgag
aaggagaaggagcccaaggacggccaggaggaggtgctcaaggacctggctgaggcagaa
ggtgagagaaagaccaaggtggagcgagacatcggcgaagggaacctgtccaccgcagcc
gctgctgccctggctgctgccgccgtgaaggccaagcacctggccgcggtggaggagcgc
aagatcaagtccctggtggccctgctggtggagacccagatgaagaagctggagatcaag
ctgcgacacttcgaggagctggagaccatcatggaccgggagcgcgaggcactggagtat
cagaggcagcagctcctggcagaccgacaggccttccacatggagcagctcaaatatgcc
gagatgcgcgccaggcagcagcacttccagcagatgcaccagcagcagcagcagccgccg
cctccgcccctcccgcccggctcccagcccatcccatcctccggggctcccttagcgcca
gccgcccactccatgcccgtggcccaggccccaggggcaccgaccacggccagcctggtg
gcccagcccagcctggctcaaacggaacagctcggccaggcggtgccggccacgccgggg
gctccgcacacagtaccggctcagcagggacagacccctgccggccctcacgcccagcct
ccgttccctggccagcagccctcctctcagatgctccctgggacggttggagtgagctgt
caccccggcgtgcccggtaatctcccggcggctccgcctttcggaatacctccatccatc
ccatttagcatggctagtaacgtagcagactccatcagtattaacctccccgctaacacg
cccgctcatccaatgcatggtaacctcccgtgcggcatgctggccgggggcgccctggcc
ccgcctaacctgcccgtcaccgtgtctagcgcgatgcaccctagcatgctgacgaccaac
ggaccgccgctcgccgcgcccgccttgcctcatgtctcgggactggcctcggcagctgcc
cagagtccagccattgtggcagccatgcagggcagtctccttccaaacgccgccctggca
ccagaccagggcccccctctgcagacggaccccatcgcacccagcacggccaccccggtc
ccacccacgcagtga
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