Mauremys reevesii (Reeves's turtle): 120391884
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Entry
120391884 CDS
T07797
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03018
RNA degradation
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120391884 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
120391884 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120391884 (LSM4)
03041 Spliceosome [BR:
mrv03041
]
120391884 (LSM4)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120391884 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
120391884 (LSM4)
Spliceosome [BR:
mrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120391884 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
120391884
NCBI-ProteinID:
XP_039372050
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All DBs
Position
LG26:complement(1474305..1483098)
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AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGGGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttatccctgttgaagactgcacagaaccaccctatgttggtggaattgaaa
aatggtgaaacgtacaacggtcacctagtgagttgcgataactggatgaacatcaacctt
agagaagtcatctgcacctcaagggacggagacaaattctggagaatgccagagtgttac
attcgcggcagcacaattaaatatttgcgtatcccagatgaaatcattgacatggtgaag
gaggaggtggtgtcaaagggcagaggtcgcggtggcatgcagcagcagaaacaacagaaa
ggccgaggaggtggcggtgccgggcgaggagtgtttggtggtcgtggccgagggatacca
gggagtggaagagggcagcaggaaaagaagccaggcagacaatctgcaaagcaatga
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integrated database retrieval system
