Mauremys reevesii (Reeves's turtle): 120392203
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Entry
120392203 CDS
T07797
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120392203 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrv03041
]
120392203 (DDX42)
Enzymes [BR:
mrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120392203 (DDX42)
Spliceosome [BR:
mrv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
120392203 (DDX42)
Complex B
120392203 (DDX42)
Complex C
U2 SnRNP specific factors
120392203 (DDX42)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
DUF4238
Motif
Other DBs
NCBI-GeneID:
120392203
NCBI-ProteinID:
XP_039372763
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Position
LG27:1622149..1653071
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AA seq
954 aa
AA seq
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MEKDIADIMNWNKGGPGTKRGFGFGGFAIAPGKKEEPKLPSQSHSAFGTPGSSAAFGKSA
PPQLPSFYKIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFNSKSGDSDSE
DDPLEAFMAEVEDQAARDMKRLEEKDKERKNTKGIRDDIEEEDDQEAYFRYMAENPTAGV
VPEEEEDNLEYDSDGNPIAPSKKVIDPLPPIDHSEIEYPPFEKNFYEEHEEISSLTPQQI
VELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRD
MIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKA
YNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRM
FDMGFEYQVRSVASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVT
QIVEILPSGPSKWNWLTRHLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDM
DQSERNKVISDFKKKGIPILVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRA
GEKGIAYTLLTPKDSNFAGDLVRNMEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLN
IGGGGLGYRERPGLGSDGSDRGSSSNVMSNYEAYKPSTGAMGDRLSAMKAAFQSQYKSHF
VAASLNNQKTGSSAAGASGWTSAGSLNSVPTNSAQQNAASPDSPIAAAAVKGIPGFTSAG
NLSSVPGYPGVGIQGYNSTSASINSREGGNGGGGGGGGGGGGGGGGGGGRERYSDNRSNR
HNDSPARHGDGSGRHSDSQRHGDGGGRHSDGYRQGDNRHGDSHRHNENRHSSGGSNSSRH
GDGRNNGDGRNMGDGRNNESRINENKKDGSNRDSKTDGFAVPEPPKRKKSRWDS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatattgctgacatcatgaactggaacaaaggtggacctggcaccaaaaga
ggctttggttttggaggatttgccatagcccctggaaagaaagaagaaccaaaactccct
tcacagtcccatagtgcttttggaacacctggctcttcagctgcgtttgggaagtcagca
ccgcctcagctcccttctttctacaaaattggatcaaagcgagcaaacttcgatgaggag
aatgcatactttgaggatgaagaggaagattccagcaatgtggatttgccatacattcct
gcagagaattcccccactcgccagcagtttaattccaaatcaggagactctgacagtgaa
gatgatcccttggaagcattcatggctgaagtggaggatcaagcagctcgagacatgaag
agacttgaagagaaagacaaggaaagaaagaatacaaagggtattcgagatgacattgaa
gaggaagatgaccaagaagcttattttcgctacatggcagaaaaccctactgctggtgtg
gtcccagaagaggaagaggataacttggaatatgatagtgatgggaatccaattgcaccg
tccaaaaaagtcatagatcctcttccacctattgatcattcagagattgaataccctcca
tttgagaagaacttctacgaggagcacgaagaaatcagcagcctcaccccacagcagata
gtggaactacgacataagctgaatctacgggtctctggtgcggctccccccagacctggc
agtagttttgctcatttcggatttgatgaacagcttatgcatcaaattcggaaatctgag
tatacccagcccactcctatacagtgtcagggtgttccggttgcattaagcggcagagac
atgattggcatagctaagactggcagtgggaaaaccgcagccttcatctggccaatgttg
atccacatcatggatcaaaaggagttggagccaggggatggtcccattgcagtgattgtg
tgcccaaccagagagctttgccaacagatccatgctgaatgtaaacgttttggtaaagcg
tataacttgcgctcggtagcggtgtatggaggaggaagtatgtgggaacaagccaaagct
ctacaggaaggggcagagatagtcgtctgcacaccaggtcgcttgattgatcatgtgaag
aagaaagctaccaatcttcaaagagtctcttatcttgtgtttgatgaagcagacagaatg
tttgacatgggtttcgaataccaagtgagatcagttgccagccatgtgcgccctgacaga
caaactctcttgttcagtgccacttttcgtaaaaagattgagaagttggccagagatatc
ctgatcgacccgattcgagtggtgcagggagacattggagaggcaaatgaagatgttacc
caaattgtggagattctcccctccggccctagcaagtggaactggctgaccaggcacctg
gtggagttcacttcttctgggagtgttcttctatttgtcaccaagaaagcgaatgcagag
gagctggccaataaccttaagcaggaggatcataacctagggctgcttcacggagacatg
gaccagagcgaaaggaataaagtcatttcagactttaagaaaaaggggatcccaattctg
gttgctactgatgtggcagctcgtggtctggatattccttccattaagactgtggtcaat
tacgatgtggcccgtgacatagacacccacacgcacagaattggacgtactggcagggct
ggtgagaaaggaatagcttacactttactgactcccaaggatagtaattttgctggtgac
cttgtcagaaatatggaaggagccaatcaacatgtttcaaaagaactcttggaccttgca
atgcagaatgcctggttccggaaatcccgtttcaagggagggaaaggcaagaagctgaac
attggcggtggtggcttaggataccgcgaacgccctggcctgggttcagatggctctgac
cgtgggagcagcagcaatgtgatgagtaactatgaggcgtacaagccatccactggggca
atgggagacagactgtctgcaatgaaagcagcatttcagtcacaatacaagagccacttt
gttgctgccagcttaaacaaccagaaaactggtagctctgctgctggggccagtggatgg
accagcgccgggagcttgaattcagtaccaacaaattcagcacagcagaatgctgcaagt
cctgacagtccgattgccgctgctgcagtaaagggaatcccaggctttaccagtgctggg
aacctgagcagtgtacctggctatccaggtgttggaattcagggatacaatagcacaagt
gccagcatcaacagcagagaaggtggcaacggcggtggcggtggtggaggtggaggagga
ggaggtggtggtggcggcggtggcggcagagaacgatacagtgacaacagaagcaatcgc
cacaatgacagtccggcgcgccatggagatggtagtggtcgccacagtgacagtcagcgc
catggagatggtggtggtcgccatagcgatggctatcgccagggagacaaccgccatggg
gacagtcaccgccacaatgaaaaccgccactctagtggtggaagcaacagtagccgacat
ggtgacggccgcaataacggtgatggccgcaatatgggtgatggtagaaacaacgagagc
aggatcaatgagaacaagaaagatggcagcaaccgggacagcaagacggatggttttgct
gtccccgagcccccaaagcgcaagaagagccgatgggacagttaa
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