Mauremys reevesii (Reeves's turtle): 120392340
Help
Entry
120392340 CDS
T07797
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03013
Nucleocytoplasmic transport
mrv03015
mRNA surveillance pathway
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120392340 (DDX39B)
09122 Translation
03013 Nucleocytoplasmic transport
120392340 (DDX39B)
03015 mRNA surveillance pathway
120392340 (DDX39B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120392340 (DDX39B)
03041 Spliceosome [BR:
mrv03041
]
120392340 (DDX39B)
Enzymes [BR:
mrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120392340 (DDX39B)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120392340 (DDX39B)
Spliceosome [BR:
mrv03041
]
Complex C
Other components
EJC/TREX
120392340 (DDX39B)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120392340 (DDX39B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
120392340
NCBI-ProteinID:
XP_039372993
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAENDVDNELLDYEDDEVENQAAGDGVDVPPKKDVKGSYVSIHSSGFRDFLLKPELLRAI
VDCGFEHPSEGQPDAWLPGLAGGPCTNAPVPQVSVLVMCHTRELAFQISKEYERFSKYMP
SVKVAVFFGGLSLETDEVVREKTCPPSVVGTPGRILALARNKSLNLKHIKHFILDECDKM
LEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHG
LQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM
PQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRF
GTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacgacgtggataacgagctgctggattacgaggatgacgaggtggagaac
caggcggccggcgacggggtggacgtgccccccaagaaggacgtcaagggctcctacgtc
tccatccacagctccggcttccgggactttctgctgaaacccgaactcctccgggccatc
gtcgactgcggcttcgagcacccctcggaaggtcagccggacgcctggttgcctgggctg
gccggggggccctgcactaacgcccctgtcccccaggtgtcggtgctggtgatgtgccac
acgcgggagctagcgttccagatcagcaaggagtacgagcgcttctccaagtacatgccc
agcgtcaaggtggcggtgttcttcgggggcctgtccctcgagacggacgaggtggtgcgg
gagaagacctgcccccccagcgtggtggggacgccgggccggatcctggccctggcgcgc
aacaagagcctcaacctcaaacacatcaagcacttcatcctggacgagtgcgacaagatg
ctggagcagctcgatatgcgccgggacgtccaggagatcttccgcatgaccccgcacgaa
aagcaggtcatgatgtttagcgccaccctgagcaaggaaatccgccccgtctgccgcaaa
ttcatgcaagaccccatggagatcttcgtggacgacgagacgaagctgacgctgcacggc
ctgcagcaatactacgtcaagctgaaggacaacgagaagaaccgcaagctcttcgacctg
ctcgacgtgctggagttcaaccaggtggtgatcttcgtcaagtcggtgcagcgctgcatc
gccctggcccagctgctggtggagcagaacttcccggccatcgccatccaccggggcatg
ccccaggaggagaggctgtcccgctaccagcagttcaaggatttccagcgccggatcctg
gtggccaccaacctcttcgggcgggggatggacatcgagcgggtcaacatcgccttcaac
tacgacatgcccgaggactccgacacctacctgcaccgggtggcgcgcgccgggcggttc
ggcaccaagggcctggccatcaccttcgtgtcggacgagaacgacgccaagatcctgaac
gacgtgcaggatcgcttcgaggtgaacatcagcgagctgcccgacgagatcgacatctcc
tcctacatcgagcagacccgataa
DBGET
integrated database retrieval system
