Mauremys reevesii (Reeves's turtle): 120393212
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Entry
120393212 CDS
T07797
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04510
Focal adhesion
mrv04512
ECM-receptor interaction
mrv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120393212 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120393212 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120393212 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrv04147
]
120393212 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120393212 (COL4A2)
Exosome [BR:
mrv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120393212 (COL4A2)
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120393212 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120393212
NCBI-ProteinID:
XP_039373720
LinkDB
All DBs
Position
LG1:111286102..111502301
Genome browser
AA seq
1750 aa
AA seq
DB search
MNAHRPGGASEGVSWDRKALLLGALHSTGEEARMRSSRSLLSRRALWQAMQVVLLLVLTS
LLTGRVKAGGKSYTGPCGGRDCSRGCECFPEKGGRGQPGLLGPQGFPGPPGLMGIPGLEG
HKGHKGERGRPGVTGPKGEVGLTGVTGFPGADGVPGHPGQPGSRGKPGHDGCNGTSGDAG
ERGSQGRSGQPGSFGIQGPKGQKGEPFVMTPELASKFRGEPGERGLLGFPGPQGAPGVVG
FIGPTGNPGKKGPQGLPGLPGEQGNRGLGFYGKKGEKGEKGPAGHPGLPSELTEVPPDII
LEEQYKGEKGIKGETGEPGTRGSPAYSAEKGEEGIMGFPGQRGLPGINGIPGAAGEKGFQ
GFDGMPGSRGPKGMKGEQGERGFQGPPVYAPFPVPRKGVSGDPGLPGVPGPAGDRGDQGN
PGLPGLPGSSDGFPDGYERRGLRGEMGAKGFSGEPGFPATQPGPPGSDGKPGLPGFPGPP
GPPGTPGYPFGLKGRQGDPGEAGSRGFPGFRGQKGLKGETGDCKCIESEEARRGPAGPPG
PPGFPGPTGQPGRKGDDGDQGQHGLPGFSGAKGFPGAVGFPGPKGEKGDPRYVTTKGTKG
DPGDPGLSGIKGEDGFQGKDGIDGLPGLPGLPGDGVRGSPGDPGYPGLQGEKGFLGDIGL
PGAGLPGPKGYRGPPGDIGTYGNPGLQGPPGPPGAPAQLDCNQVTEDQGIKTVWSGAECV
RAPKGSPGKPGLPGAIGAKGAKGIPGEPGLDGFQGLKGSQGDPGREGLPGPRGFTGPRGD
GGPPGLPGLPGNPGNAGKPGAPGPIGPKGIAGEVLGAAPGTPGDFGPSGFPGLKGLQGDH
GVPGIRGADGTPGFPGPKGLQGPPGPLGLPGLPGRPGLHGFPGLPGQQGPSGRTGSPGFV
GSLGARGDQGDQGFPGPVGMKGLAGDKGELGNKGVQGTPGVPGLPGIDGMPGFPGLKGAK
GSPGIGGFKGMLGQKGKPGLKGLKGEVGSFGNQGFKGLPGEPGHKGDRGEQGPAGKPPKI
MPSMLFEVKGEKGDIGDPGLKGNVGFKGSKGMPGLPGKSGVPGFPGSNSHIEGEKGDAGI
KGVTGILGYPGAIGPPGIRGFPGTTGIRGEKGIEGIRGDYGRPGPAGQTGDRGDTINLPG
STGLKGEAGETGSLGVKGTRGHKGEGGDPGFIGIEGLKGIQGFPGLKGQKGFPGLVGPPG
SQGDPGIPGFQGEKGSHGWPGLAGQAGLPGFRGISGLDGLLGTKGLPGSPGPDAYGTEGL
PGIYGDKGEAGEPNTIEGPRGAPGQKGERGNPGERGPIGDPGADGIPGFPGVSNISGIPG
DVGSAGLDGVPGYPGPRGRPGIPAPVGSKGEDGQIGVLGEDGQKGTRGDPGPQGRPGISG
YPGPKGHKGAQGLMGTLGLVGAFGDTGPIGPKGDRGPTGFQGPPGSPGLPAVPPKLVTHQ
GTAGPRGNMGTQGIPGEMGPHGPPGDPGFRGPPGKPGFQGRGGMSALPGFRGDQGPSGFP
GLAGLEGEPGRQGNPGIPGMPGRSVNIGYLLVKHSQSEQEPMCPVGMNKLWSGYSLLYFE
GQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYANRNDKSYWLSTTAPLPMMPVAEE
EIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPEGWRSLWIGYSFLMHTGAGDEGGGQSLV
SPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTINQQFQSLPSADTLKAGLIRTHI
SRCQVCMKNL
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcacaggccaggaggtgcctcagaaggggtttcctgggacaggaaagcattg
ctgctgggagccctgcacagcactggagaggaagcaaggatgaggagctcgcggtccctc
ctctcacgtcgtgccctttggcaggctatgcaggtcgtgctgctcttggtgttgacttca
ctgttaactggcagagtaaaagctggtggaaaatcttacacaggaccatgtggaggaaga
gactgtagtaggggatgtgaatgtttccctgaaaaaggaggccgtggtcaaccaggacta
cttggacctcaggggttccctggaccaccaggattaatgggtatcccaggtttagaaggt
cacaaaggtcacaaaggtgaaagagggcgacctggagtaactggaccaaaaggagaagtg
gggctaacaggagtaactggtttccctggtgcagatggtgttcctggtcatcctgggcag
ccaggatcaagggggaaaccaggtcacgatggctgcaatgggaccagcggtgatgctggt
gaacgaggaagtcaggggcgcagcggtcaacctggttcttttggaatccaaggaccaaaa
ggtcagaagggggaaccttttgtaatgactcctgagctagcaagcaaattcaggggagag
cctggcgagcggggattgttgggctttccaggacctcaaggtgctcctggtgttgtgggt
ttcattggtccaacaggaaatccaggaaagaaaggaccacaagggctaccaggtttgcca
ggagaacaaggcaacaggggcctgggtttttatggaaaaaaaggtgaaaagggtgaaaaa
ggtccagcgggccatcctgggcttccatcggagctgacggaagttcccccagacataatc
ctagaagaacaatacaagggtgaaaagggaataaaaggagaaacaggagaacctggaact
cgaggctcacccgcatattcagcagaaaaaggagaagaaggaataatgggttttccagga
caaaggggattacctggtatcaatggcatcccaggagctgccggggaaaaaggtttccaa
ggatttgatggcatgccaggcagccgtggtcctaaaggaatgaagggagagcagggtgag
agagggtttcaaggaccacctgtttatgctccgtttcccgttccaagaaaaggtgtatca
ggtgatccaggattgccaggtgttcctgggcctgcaggagaccgaggggaccaaggaaat
cccggccttcctggtcttcctggatcgtcagatggctttcctgatggctatgaaagaaga
ggtttacgtggagaaatgggtgccaaaggttttagtggagaaccaggttttccagcaact
cagccaggcccaccaggtagtgatggtaaaccaggacttccaggattccctggcccacct
ggtcctccaggaactccaggctatccttttggactgaagggacgccagggggatccaggt
gaggcgggcagccgaggtttccctgggttccgaggacaaaaaggattgaaaggtgaaaca
ggggactgtaaatgtattgaaagtgaggaagccagacggggtcctgctggtccacccggt
ccaccaggttttccaggcccaactggacagcctggacggaaaggagatgatggagatcaa
ggtcagcatggtcttccaggcttctctggtgcaaaaggatttcctggtgcagtcggattt
cctgggccaaaaggggagaaaggagatcctagatatgttacaacaaaaggtaccaaagga
gacccaggagatcctggactatctggcattaaaggtgaagatgggtttcaaggaaaagat
ggcatagatggcttaccagggcttcctggccttccaggtgatggtgtaagaggttcacca
ggtgaccctggttatccaggactacaaggtgaaaagggctttctgggagatattggtctg
ccaggtgcaggcttacctggcccaaaaggataccgtggccctccaggtgacattggaaca
tatggaaatccaggacttcaaggtcccccaggtcctccaggtgctcctgcccaattagat
tgtaaccaagttactgaagatcaaggcatcaagacagtttggtcaggggcagaatgcgtg
agagcaccaaaaggatccccaggaaagccgggattgccaggagctataggtgcaaaaggt
gctaaagggattccaggtgaaccaggtctggatggattccaagggctaaaaggttcacaa
ggtgatccaggtcgtgaaggattaccaggtcctcgaggttttactggaccccggggagat
ggaggcccaccaggtctaccagggctaccggggaatccaggcaatgcaggaaaaccaggt
gccccagggcctataggaccaaaaggaattgcaggtgaagttttaggagcagcaccaggc
accccaggagattttggaccatctggattcccaggattgaaaggcctacaaggagatcac
ggagtaccaggaattagaggagctgatggtacgccaggttttccaggacccaaaggactg
caaggacccccaggtcctcttggtttgcctggcctgccaggacgaccaggattgcatgga
ttcccagggcttccaggacagcaaggaccttccggcagaactggctcaccaggatttgtt
ggttcacttggtgccagaggagatcaaggtgaccaaggttttcctggtccagtgggcatg
aaaggtctggctggtgacaaaggtgaactcggtaacaaaggagtacaaggaacacctggg
gtgcctggtctcccgggaatagacggaatgcctggctttccagggttaaaaggtgctaaa
ggttcacctggtattggaggtttcaaaggtatgttaggccagaaaggaaaaccaggactg
aaaggactcaaaggcgaagtcggctcttttggcaatcagggttttaaaggtctaccgggg
gaaccaggccataaaggtgaccgtggggaacagggtccagcaggaaaaccaccaaagatc
atgccaagcatgctgtttgaggttaaaggtgagaaaggagatataggagaccctggccta
aaaggaaatgtaggctttaaaggtagtaaaggaatgccaggcttacctggcaaatcagga
gttccaggtttccctggatcaaatagtcacattgaaggtgagaaaggagacgctggtatt
aaaggagtgacaggtattctggggtatcctggtgcaattggaccacctggcatacgaggt
ttccctggaaccactggaatcaggggtgaaaagggtattgaaggaatcagaggtgattat
ggtagacctggccctgctggacaaactggtgatcgaggagatactataaacttaccagga
agcacaggtctgaaaggagaagctggcgaaactggatcattgggtgtgaaaggaaccaga
ggacataaaggtgaaggaggtgatcctggttttattggcattgaaggcctaaaaggcatc
caaggttttcctggtttaaaagggcaaaaaggcttcccagggctggttggaccaccagga
tcacagggagacccaggtattcctggatttcaaggtgaaaaaggaagtcatggatggcct
ggtttagcaggacaagcaggtttacctggcttccgaggaatcagtggattggatggtttg
ctaggaactaagggcttgccaggctccccaggtccagatgcatatgggactgaaggtttg
ccaggtatttatggtgacaaaggggaagcaggcgaaccaaacactattgaaggccccaga
ggagcgccaggtcagaaaggagagagaggcaatccaggggaacgaggcccaattggtgac
ccaggggctgatggaattccaggctttcctggagtttcaaacatatcaggaatacctggt
gatgtgggttctgcaggtctagatggagtgccaggctatccaggaccccggggcagacct
ggaattccagctccagtgggaagcaaaggagaagatggtcaaataggtgtgcttggagaa
gatggtcaaaaaggaactagaggtgaccctggaccacaagggagacctggaatttcaggg
taccctggaccaaaagggcataaaggtgcgcaaggtctcatgggtactcttggcttagtg
ggagcttttggtgacacagggcccattggacccaagggggacagaggacctactggtttc
caaggacctccaggttctcctgggctgcctgcagtcccccctaagctggtcactcaccag
ggtacagcaggccctcgtggaaatatgggtacgcaaggaatacctggtgagatggggccc
cacggtccaccaggtgatccaggttttagaggcccaccaggtaaaccagggttccaagga
agaggtggcatgtcagctcttccaggttttagaggagatcaaggaccatcaggttttcca
ggtcttgcaggcttggagggtgaaccaggccgtcaaggtaaccctgggataccaggtatg
ccaggtcgcagtgttaacattgggtaccttctggtgaagcatagccagtctgagcaagag
ccaatgtgcccagttggtatgaacaaactctggagtggctacagtctactgtattttgaa
ggacaggaaaaagcacataaccaggaccttgggctggctggatcctgtttggctcgtttt
agtaccatgcctttcctctactgtaaccctggggacatctgttattatgcaaaccgaaat
gataaatcctactggctctcaaccacagcacctcttccaatgatgcctgtggcagaagaa
gaaattagaccatatatcagtcgttgttccgtctgtgaagccccagctgttgcaattgct
gtccatagtcaagatgtttctattccacactgtcctgaagggtggcgcagtttatggatt
ggatattccttcctcatgcacactggagctggtgatgaaggcggaggacagtcactggtt
tctcctgggagctgtctggaagacttcagagctactcctttcattgaatgcaatggtgcc
cgaggaacctgccactactatgcaaacaagtatagcttctggcttaccactattaaccag
caattccagagcttgccctcagcagatacactcaaggcaggtctcatccgaactcatatc
agcagatgtcaagtctgcatgaaaaatttgtaa
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