Mauremys reevesii (Reeves's turtle): 120393212
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Entry
120393212 CDS
T07797
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04382
Cornified envelope formation
mrv04510
Focal adhesion
mrv04512
ECM-receptor interaction
mrv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120393212 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120393212 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120393212 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120393212 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrv04147
]
120393212 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120393212 (COL4A2)
Exosome [BR:
mrv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120393212 (COL4A2)
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120393212 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120393212
NCBI-ProteinID:
XP_039373720
LinkDB
All DBs
Position
LG1:111286102..111502301
Genome browser
AA seq
1750 aa
AA seq
DB search
MNAHRPGGASEGVSWDRKALLLGALHSTGEEARMRSSRSLLSRRALWQAMQVVLLLVLTS
LLTGRVKAGGKSYTGPCGGRDCSRGCECFPEKGGRGQPGLLGPQGFPGPPGLMGIPGLEG
HKGHKGERGRPGVTGPKGEVGLTGVTGFPGADGVPGHPGQPGSRGKPGHDGCNGTSGDAG
ERGSQGRSGQPGSFGIQGPKGQKGEPFVMTPELASKFRGEPGERGLLGFPGPQGAPGVVG
FIGPTGNPGKKGPQGLPGLPGEQGNRGLGFYGKKGEKGEKGPAGHPGLPSELTEVPPDII
LEEQYKGEKGIKGETGEPGTRGSPAYSAEKGEEGIMGFPGQRGLPGINGIPGAAGEKGFQ
GFDGMPGSRGPKGMKGEQGERGFQGPPVYAPFPVPRKGVSGDPGLPGVPGPAGDRGDQGN
PGLPGLPGSSDGFPDGYERRGLRGEMGAKGFSGEPGFPATQPGPPGSDGKPGLPGFPGPP
GPPGTPGYPFGLKGRQGDPGEAGSRGFPGFRGQKGLKGETGDCKCIESEEARRGPAGPPG
PPGFPGPTGQPGRKGDDGDQGQHGLPGFSGAKGFPGAVGFPGPKGEKGDPRYVTTKGTKG
DPGDPGLSGIKGEDGFQGKDGIDGLPGLPGLPGDGVRGSPGDPGYPGLQGEKGFLGDIGL
PGAGLPGPKGYRGPPGDIGTYGNPGLQGPPGPPGAPAQLDCNQVTEDQGIKTVWSGAECV
RAPKGSPGKPGLPGAIGAKGAKGIPGEPGLDGFQGLKGSQGDPGREGLPGPRGFTGPRGD
GGPPGLPGLPGNPGNAGKPGAPGPIGPKGIAGEVLGAAPGTPGDFGPSGFPGLKGLQGDH
GVPGIRGADGTPGFPGPKGLQGPPGPLGLPGLPGRPGLHGFPGLPGQQGPSGRTGSPGFV
GSLGARGDQGDQGFPGPVGMKGLAGDKGELGNKGVQGTPGVPGLPGIDGMPGFPGLKGAK
GSPGIGGFKGMLGQKGKPGLKGLKGEVGSFGNQGFKGLPGEPGHKGDRGEQGPAGKPPKI
MPSMLFEVKGEKGDIGDPGLKGNVGFKGSKGMPGLPGKSGVPGFPGSNSHIEGEKGDAGI
KGVTGILGYPGAIGPPGIRGFPGTTGIRGEKGIEGIRGDYGRPGPAGQTGDRGDTINLPG
STGLKGEAGETGSLGVKGTRGHKGEGGDPGFIGIEGLKGIQGFPGLKGQKGFPGLVGPPG
SQGDPGIPGFQGEKGSHGWPGLAGQAGLPGFRGISGLDGLLGTKGLPGSPGPDAYGTEGL
PGIYGDKGEAGEPNTIEGPRGAPGQKGERGNPGERGPIGDPGADGIPGFPGVSNISGIPG
DVGSAGLDGVPGYPGPRGRPGIPAPVGSKGEDGQIGVLGEDGQKGTRGDPGPQGRPGISG
YPGPKGHKGAQGLMGTLGLVGAFGDTGPIGPKGDRGPTGFQGPPGSPGLPAVPPKLVTHQ
GTAGPRGNMGTQGIPGEMGPHGPPGDPGFRGPPGKPGFQGRGGMSALPGFRGDQGPSGFP
GLAGLEGEPGRQGNPGIPGMPGRSVNIGYLLVKHSQSEQEPMCPVGMNKLWSGYSLLYFE
GQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYANRNDKSYWLSTTAPLPMMPVAEE
EIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPEGWRSLWIGYSFLMHTGAGDEGGGQSLV
SPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTINQQFQSLPSADTLKAGLIRTHI
SRCQVCMKNL
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcacaggccaggaggtgcctcagaaggggtttcctgggacaggaaagcattg
ctgctgggagccctgcacagcactggagaggaagcaaggatgaggagctcgcggtccctc
ctctcacgtcgtgccctttggcaggctatgcaggtcgtgctgctcttggtgttgacttca
ctgttaactggcagagtaaaagctggtggaaaatcttacacaggaccatgtggaggaaga
gactgtagtaggggatgtgaatgtttccctgaaaaaggaggccgtggtcaaccaggacta
cttggacctcaggggttccctggaccaccaggattaatgggtatcccaggtttagaaggt
cacaaaggtcacaaaggtgaaagagggcgacctggagtaactggaccaaaaggagaagtg
gggctaacaggagtaactggtttccctggtgcagatggtgttcctggtcatcctgggcag
ccaggatcaagggggaaaccaggtcacgatggctgcaatgggaccagcggtgatgctggt
gaacgaggaagtcaggggcgcagcggtcaacctggttcttttggaatccaaggaccaaaa
ggtcagaagggggaaccttttgtaatgactcctgagctagcaagcaaattcaggggagag
cctggcgagcggggattgttgggctttccaggacctcaaggtgctcctggtgttgtgggt
ttcattggtccaacaggaaatccaggaaagaaaggaccacaagggctaccaggtttgcca
ggagaacaaggcaacaggggcctgggtttttatggaaaaaaaggtgaaaagggtgaaaaa
ggtccagcgggccatcctgggcttccatcggagctgacggaagttcccccagacataatc
ctagaagaacaatacaagggtgaaaagggaataaaaggagaaacaggagaacctggaact
cgaggctcacccgcatattcagcagaaaaaggagaagaaggaataatgggttttccagga
caaaggggattacctggtatcaatggcatcccaggagctgccggggaaaaaggtttccaa
ggatttgatggcatgccaggcagccgtggtcctaaaggaatgaagggagagcagggtgag
agagggtttcaaggaccacctgtttatgctccgtttcccgttccaagaaaaggtgtatca
ggtgatccaggattgccaggtgttcctgggcctgcaggagaccgaggggaccaaggaaat
cccggccttcctggtcttcctggatcgtcagatggctttcctgatggctatgaaagaaga
ggtttacgtggagaaatgggtgccaaaggttttagtggagaaccaggttttccagcaact
cagccaggcccaccaggtagtgatggtaaaccaggacttccaggattccctggcccacct
ggtcctccaggaactccaggctatccttttggactgaagggacgccagggggatccaggt
gaggcgggcagccgaggtttccctgggttccgaggacaaaaaggattgaaaggtgaaaca
ggggactgtaaatgtattgaaagtgaggaagccagacggggtcctgctggtccacccggt
ccaccaggttttccaggcccaactggacagcctggacggaaaggagatgatggagatcaa
ggtcagcatggtcttccaggcttctctggtgcaaaaggatttcctggtgcagtcggattt
cctgggccaaaaggggagaaaggagatcctagatatgttacaacaaaaggtaccaaagga
gacccaggagatcctggactatctggcattaaaggtgaagatgggtttcaaggaaaagat
ggcatagatggcttaccagggcttcctggccttccaggtgatggtgtaagaggttcacca
ggtgaccctggttatccaggactacaaggtgaaaagggctttctgggagatattggtctg
ccaggtgcaggcttacctggcccaaaaggataccgtggccctccaggtgacattggaaca
tatggaaatccaggacttcaaggtcccccaggtcctccaggtgctcctgcccaattagat
tgtaaccaagttactgaagatcaaggcatcaagacagtttggtcaggggcagaatgcgtg
agagcaccaaaaggatccccaggaaagccgggattgccaggagctataggtgcaaaaggt
gctaaagggattccaggtgaaccaggtctggatggattccaagggctaaaaggttcacaa
ggtgatccaggtcgtgaaggattaccaggtcctcgaggttttactggaccccggggagat
ggaggcccaccaggtctaccagggctaccggggaatccaggcaatgcaggaaaaccaggt
gccccagggcctataggaccaaaaggaattgcaggtgaagttttaggagcagcaccaggc
accccaggagattttggaccatctggattcccaggattgaaaggcctacaaggagatcac
ggagtaccaggaattagaggagctgatggtacgccaggttttccaggacccaaaggactg
caaggacccccaggtcctcttggtttgcctggcctgccaggacgaccaggattgcatgga
ttcccagggcttccaggacagcaaggaccttccggcagaactggctcaccaggatttgtt
ggttcacttggtgccagaggagatcaaggtgaccaaggttttcctggtccagtgggcatg
aaaggtctggctggtgacaaaggtgaactcggtaacaaaggagtacaaggaacacctggg
gtgcctggtctcccgggaatagacggaatgcctggctttccagggttaaaaggtgctaaa
ggttcacctggtattggaggtttcaaaggtatgttaggccagaaaggaaaaccaggactg
aaaggactcaaaggcgaagtcggctcttttggcaatcagggttttaaaggtctaccgggg
gaaccaggccataaaggtgaccgtggggaacagggtccagcaggaaaaccaccaaagatc
atgccaagcatgctgtttgaggttaaaggtgagaaaggagatataggagaccctggccta
aaaggaaatgtaggctttaaaggtagtaaaggaatgccaggcttacctggcaaatcagga
gttccaggtttccctggatcaaatagtcacattgaaggtgagaaaggagacgctggtatt
aaaggagtgacaggtattctggggtatcctggtgcaattggaccacctggcatacgaggt
ttccctggaaccactggaatcaggggtgaaaagggtattgaaggaatcagaggtgattat
ggtagacctggccctgctggacaaactggtgatcgaggagatactataaacttaccagga
agcacaggtctgaaaggagaagctggcgaaactggatcattgggtgtgaaaggaaccaga
ggacataaaggtgaaggaggtgatcctggttttattggcattgaaggcctaaaaggcatc
caaggttttcctggtttaaaagggcaaaaaggcttcccagggctggttggaccaccagga
tcacagggagacccaggtattcctggatttcaaggtgaaaaaggaagtcatggatggcct
ggtttagcaggacaagcaggtttacctggcttccgaggaatcagtggattggatggtttg
ctaggaactaagggcttgccaggctccccaggtccagatgcatatgggactgaaggtttg
ccaggtatttatggtgacaaaggggaagcaggcgaaccaaacactattgaaggccccaga
ggagcgccaggtcagaaaggagagagaggcaatccaggggaacgaggcccaattggtgac
ccaggggctgatggaattccaggctttcctggagtttcaaacatatcaggaatacctggt
gatgtgggttctgcaggtctagatggagtgccaggctatccaggaccccggggcagacct
ggaattccagctccagtgggaagcaaaggagaagatggtcaaataggtgtgcttggagaa
gatggtcaaaaaggaactagaggtgaccctggaccacaagggagacctggaatttcaggg
taccctggaccaaaagggcataaaggtgcgcaaggtctcatgggtactcttggcttagtg
ggagcttttggtgacacagggcccattggacccaagggggacagaggacctactggtttc
caaggacctccaggttctcctgggctgcctgcagtcccccctaagctggtcactcaccag
ggtacagcaggccctcgtggaaatatgggtacgcaaggaatacctggtgagatggggccc
cacggtccaccaggtgatccaggttttagaggcccaccaggtaaaccagggttccaagga
agaggtggcatgtcagctcttccaggttttagaggagatcaaggaccatcaggttttcca
ggtcttgcaggcttggagggtgaaccaggccgtcaaggtaaccctgggataccaggtatg
ccaggtcgcagtgttaacattgggtaccttctggtgaagcatagccagtctgagcaagag
ccaatgtgcccagttggtatgaacaaactctggagtggctacagtctactgtattttgaa
ggacaggaaaaagcacataaccaggaccttgggctggctggatcctgtttggctcgtttt
agtaccatgcctttcctctactgtaaccctggggacatctgttattatgcaaaccgaaat
gataaatcctactggctctcaaccacagcacctcttccaatgatgcctgtggcagaagaa
gaaattagaccatatatcagtcgttgttccgtctgtgaagccccagctgttgcaattgct
gtccatagtcaagatgtttctattccacactgtcctgaagggtggcgcagtttatggatt
ggatattccttcctcatgcacactggagctggtgatgaaggcggaggacagtcactggtt
tctcctgggagctgtctggaagacttcagagctactcctttcattgaatgcaatggtgcc
cgaggaacctgccactactatgcaaacaagtatagcttctggcttaccactattaaccag
caattccagagcttgccctcagcagatacactcaaggcaggtctcatccgaactcatatc
agcagatgtcaagtctgcatgaaaaatttgtaa
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