Mauremys reevesii (Reeves's turtle): 120393451
Help
Entry
120393451 CDS
T07797
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120393451 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120393451 (PATL1)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120393451 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
120393451 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Mdt-12_N
Motif
Other DBs
NCBI-GeneID:
120393451
NCBI-ProteinID:
XP_039373945
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MCVFRDGEACVSRGGGSEPEWGPRGASLAVGVSAPLTMFRYQSLEDCPLDEDEDAFQTLG
EEDEDIDQFNDDTFGAGAIDDDWQEAHERLAELEDKPATARELEDGAVSDEMELLGHHEE
NLAERLSKLVIENELEDPAIMQAVQTQPPMQQPGGLNSSIWDGSAVLRRIRGPLLTQEMP
SVSVLEYAMPQRPPQGQEDERDLSERALPRRSSSPVIGSPPVRAVPIGTPPKQATVPNFN
QQILCPKPVHIRAPMQQRYPSPYGERMSPNQLCSVPNSSLLGHPFPPSVTPVFTHLQRAQ
LLGGAQAGRMSPSQFARVSGLVGSPLTSMNPKLLQGRVGQMMSPASGFRAFFGAPPPPTP
PPSQQQHPPCPGSHLQNLRPHPQMFRPDTTHLHPQHRRLLHQRQQQNRNQHRSLNGSAGD
RAGHRSSHQEQLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFQKLEKVS
AAEEMHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSR
SEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERRYLLSLEGERPALMEERKQKICD
MYDNLRGKAPGQERPSDDHFVQIMCIRKGKRMVTRILPFLSMEQAADILMATARNLPFLI
KKDAQDEVLLCLLRPFSLVLYHLPSGTVTSLLQQLANLPQSATAPAPANLHLAAVLQNKF
GLSLLYLVLSRGEELQNSSAATELMQDNQWTELMSMATRELLRIPEAALAKPVSTPSNLL
SLFSRYVDQQKLNILETKLQLVQGIR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgttccgtgacggcgaagcgtgcgtatcgaggggcgggggctcggagccggag
tggggtccgcgcggggcctccctggcggtgggagtctccgcgccgctcaccatgttccgc
taccagtccctggaggactgtcctctggatgaagatgaagatgcctttcagaccctgggc
gaggaagatgaagatattgaccagttcaatgatgacacatttggagccggtgctattgat
gatgactggcaggaggcacatgagcggctcgcagaactggaagacaagcctgcaacagct
agagagctggaagatggtgcagtcagtgatgagatggagctgctggggcaccatgaggag
aacctggctgagagattgagcaagctggtcatcgagaacgagttggaagatccagccatc
atgcaggctgtgcaaacccagcctccaatgcagcagccaggaggcctcaactccagcatc
tgggatggatccgcagttctgaggcgcatccgaggaccacttctcactcaggagatgccc
tcagtgtctgtgctggaatatgctatgcctcagagacccccgcagggccaggaggatgag
cgggacctctcggagcgggcgctgcccaggcgctcgtcctcccccgtcattgggagcccc
cctgtcagggctgtccccatcggcaccccaccaaagcaggccaccgtgcccaacttcaac
cagcagatcctgtgtccgaagcctgttcacatccgggccccgatgcaacagcgttatcct
tccccgtacggcgagaggatgtccccaaaccagctctgcagtgtcccgaattcttccctc
ctgggccacccgttccctcccagcgtcactcctgttttcacccaccttcagagagcgcag
cttctaggaggagcacaggctggacgaatgtctcccagccagtttgctcgtgtctctgga
ctcgttggcagccccctcacctccatgaaccccaagttgcttcaaggcagagttgggcag
atgatgtctccagccagtgggttccgtgccttttttggggcgccaccgcctcccacacca
cccccatcccagcagcagcaccccccatgtcctgggtcccacttgcagaacctaaggcct
cacccgcagatgttcagaccagatacaactcaccttcacccgcagcatcggcggctctta
catcagagacagcagcagaacaggaaccaacaccggagtctgaatggctcggcaggggac
cgagctggccaccggagcagccatcaggagcagctgcgaaaggacccctatgccaatctc
atgttgcagcgggaaaaggactgggtatcaaagatccagatgatgcagttgcaaagcact
gacccttacttagatgacttctactatcagaattacttccagaagctggagaaagtgtca
gcggcagaggagatgcacggtgatggccccaagaaagaacgtactaaactcatcacaccc
caagtggccaagttagagcatgcctacaagccagtgcagtttgagggctcgctggggaag
ctcacagtctccagtgtaaataacccccggaaaatgattgacgcggtggtgacctcccgc
agtgaggacgatgagacaaaggagaagcaggttcgagacaagagacgtcagaccctcgtc
accattgagaagacgtacagcctcctcctggatgtggaggactacgagaggcgctacctc
ctgagcctggagggggagcggccggccctgatggaggagagaaagcagaagatctgtgac
atgtatgacaatctgagggggaaagcaccgggccaagagaggccaagtgacgaccacttt
gtgcaaatcatgtgtatccggaaagggaagcgtatggttacccggatcctgccctttctg
tccatggagcaagcggctgacatactcatggcaacagccagaaacctgcccttcctgatc
aagaaggatgctcaggatgaggtgctgctgtgcctgttgaggcccttctctctcgttctc
tatcatcttccgtcggggacagtcaccagccttctgcagcagctagcgaacctacctcag
agcgccacggcgccagcacctgccaacctgcacctcgcagctgtgctccagaacaagttt
ggcctgtccctgctgtacttggtcctgagtcgtggggaggaattgcagaattccagtgct
gctacggagctaatgcaggacaaccagtggacggagctgatgtccatggcaacccgagag
cttctgcggatccctgaagcagcgctggcaaagccagtatccaccccctctaacctgctg
tcccttttttctcgctatgttgatcagcagaagctgaacatactggagacaaagttgcag
ttagtgcaggggatacggtag
DBGET
integrated database retrieval system
