Mauremys reevesii (Reeves's turtle): 120396688
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Entry
120396688 CDS
T07797
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120396688 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mrv01002
]
120396688 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120396688 (SHH)
Peptidases and inhibitors [BR:
mrv01002
]
Cysteine peptidases
Family C46: hedgehog family
120396688 (SHH)
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Morphogens
120396688 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
120396688
NCBI-ProteinID:
XP_039377663
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Position
LG2:complement(19208251..19221591)
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AA seq
428 aa
AA seq
DB search
MDEMLLLTRILLVGFICVLLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKRVRDLSPGDRVLAADAQGRLLYSD
FLAFLDREPGAPRLFYVIETRQPRARLLLTAAHLLFVAPPRNHSQPEPEPEPARRRALFA
SRVRPGQRVYVLGEGGRRLLPAAVHSVSLREEASGAYAPLTAQGTILINRVLASCYAVIE
EHSWAHWAFAPLRLAHALLAVLSPGAGLPEAEPAPPGLHWYSRLLYRLGSWVLDSDSLHP
LGMAVQAS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctgttggtgggcttcatctgcgttcttttg
gtctcctctgggctgacttgtggaccaggcaggggtattggaaaaaggagacaccccaaa
aaactgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatctcaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacactggagctgacagactg
atgactcagagatgcaaagacaagctgaacgccctggcgatctcggtgatgaaccagtgg
cccggagtgaagctgagggtgaccgagggatgggatgaagatgggcaccactccgaggag
tcgctgcattacgagggccgggccgtggacatcaccacctcggacagggaccgcagcaag
tacggcatgctggcgcggctggcggtggaggctggcttcgactgggtctactacgagtcc
aaggcccacatccactgctccgtcaaagcagagaactcggtggccgccaagtcgggcggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcacgaagcgcgtgcgggac
ctgagccccggggaccgcgtgctggcggcggacgcgcagggccggctgctctacagcgac
ttcctggccttcctggaccgcgagccgggcgcccccaggctcttctacgtgatcgagacg
cggcagccgcgcgcccgcctgctgctcaccgccgcccacctgctcttcgtggcgcccccg
cgcaaccactcccagcccgagcccgagccagagcccgcccgccgccgcgccctcttcgcc
agccgcgtgcggccgggccagcgggtctacgtgctgggcgagggcggccggcggctgctg
cccgccgcggtgcacagcgtctccctgcgggaggaggcctcgggcgcctacgccccgctc
acggcccagggcaccatcctcatcaaccgggtgctggcctcctgctacgccgtcatcgag
gagcacagctgggcgcactgggccttcgcccccctgcgcctggcccacgcgctgctggcc
gtgctctcccccggcgccggcctgcccgaggcggagcccgccccgcccggcctgcactgg
tactcgcgcctcctctaccgcctcggcagctgggtgctggacagtgactccctgcacccg
ctgggcatggccgtgcaggccagctga
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