Mauremys reevesii (Reeves's turtle): 120396929
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Entry
120396929 CDS
T07797
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03015
mRNA surveillance pathway
mrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120396929 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
120396929 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120396929 (PABPC1)
03041 Spliceosome [BR:
mrv03041
]
120396929 (PABPC1)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120396929 (PABPC1)
mRNA cycle factors
Stress granule specific factors
120396929 (PABPC1)
Spliceosome [BR:
mrv03041
]
Complex C
Other components
Complex C specific factors
120396929 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_10
RRM_5
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
120396929
NCBI-ProteinID:
XP_039378110
LinkDB
All DBs
Position
LG2
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AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAALPPTQNRA
AYYPTSQLAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNTQPQVAMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNNPTGVPSV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctccctgtacgtgggggacctgcacccc
gacgtcaccgaggccatgctctacgagaagttcagccccgccgggcccatcctctccatc
cgcgtctgccgggacatgatcacccgcaggtctctaggctacgcctatgtcaacttccag
caacccgccgacgctgaacgagctttggataccatgaacttcgatgtcattaaaggcaag
ccagtgcgcatcatgtggtctcagcgtgatccatctctacgcaaaagtggtgttggaaac
atcttcatcaagaacttggacaaatcaattgataataaagctttgtatgatacattttct
gcttttggaaacatcctctcctgtaaggtagtatgtgatgaaaatgggtccaagggctat
ggatttgtacattttgagacacaggaagcagcagaaagagctattgaaaaaatgaacggt
atgctgcttaatgaccgcaaagtatttgttggaaggtttaaatcccgtaaagaacgagaa
gcagaacttggagctagagcaaaggagttcaccaatgtttacatcaagaattttggagaa
gacatggatgatgaaagacttaaggaactctttggcaagtttggccctgccttaagtgtg
aaagttatgaccgatgagagtggaaaatccaaaggctttggctttgttagctttgaaaga
catgaagatgcccagaaagctgtggatgagatgaatggaaaggagctcaatggaaagcaa
atttatgttggccgggctcagaaaaaagtggaaagacaaacagagctcaagcgcaaattc
gaacaaatgaagcaggacaggatcaccagataccagggtgtaaacctttatgtgaaaaat
cttgatgatgggattgatgacgaacgtctaagaaaagaattctccccatttggtacaatc
actagtgcaaaggtcatgatggaaggtggccgcagcaaagggtttgggtttgtatgcttt
tcttcaccagaagaagcaaccaaagctgtcacagaaatgaatggtagaattgtggccact
aaaccattatatgtagctctagcccaacgcaaagaagagcgccaggctcacctcaccaac
caatatatgcagagaatggcaagtgtgagagcagtacctaatcctgtaatcaacccctac
caaccagcacctccttcaggttacttcatggcagctctcccaccgactcagaaccgtgct
gcatattatccaactagccaacttgctcagctcagaccaagtcctcgctggactgctcag
ggtgctagacctcatccattccagaacatgcctggtgctatccgcccagcagcacccaga
ccaccctttagtaccatgaggccagcttcttcacaggttccacgagtcatgtcaacacaa
cgtgttgctaatacatcaacacagacaatgggtccacgtcctgcagcagctgctgctgca
gccactcctgctgtacgcacagttccacagtacaagtatgctgcaggtgttcgtaatcct
cagcaacatcttaacacacagccacaggttgctatgcagcagccagctgtccatgtgcaa
ggtcaggaacccttgactgcttccatgttggcttctgcccctccacaagaacaaaagcag
atgttaggtgaacggctgtttccccttattcaagctatgcaccctactctggcgggtaaa
atcaccggtatgttgttggagattgacaactctgaactccttcatatgcttgagtctcct
gagtctcttcgttcgaaggttgatgaagctgtagctgtactacaagcccaccaagctaaa
gaggctgctcagaaagcagttaacaatcccactggggttccaagtgtttaa
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