Mauremys reevesii (Reeves's turtle): 120397040
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Entry
120397040 CDS
T07797
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120397040 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrv03400
]
120397040 (POLB)
Enzymes [BR:
mrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120397040 (POLB)
DNA repair and recombination proteins [BR:
mrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
120397040 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
120397040 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
NTP_transf_2
Cdd1
DUF3900
Motif
Other DBs
NCBI-GeneID:
120397040
NCBI-ProteinID:
XP_039378393
LinkDB
All DBs
Position
LG2:complement(161513611..161538821)
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQESPNAGITDFLSELANYEKNVNRAIHKYNAYRKAASVISKYPSKIKSGAEAK
KLEGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKFVDEGIK
TLEDLKKNEHKLNHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVKKLDPEYIATVCGS
FRRGAESSGDMDILLTHPSFTSESTKQPKLLHQVVEQLKKIHFVTDTLSKGDTKFMGVCQ
LPSEEDGTNYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEMGFTINEYTIRP
LGVTGVAGEPLPVESEKDIFDYIQWKYREPKERSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaggcgccgcaggagagccccaatgcggggatcacagacttcctgagc
gaactggcaaattatgagaagaacgtgaaccgagccatccacaagtacaatgcgtacaga
aaagcagcttctgtaatatccaagtatccaagcaagataaaaagtggagctgaagcaaag
aagctggaaggagtaggggctaaaatagctgagaagattgatgagtttttatccactgga
aaactacgtaagcttgaaaagattcgacaggatgatacaagctcatctatcaatttcctg
acccgagttactggcataggtccttctgcagctaggaagtttgtggatgaagggataaag
acattggaagatctaaagaaaaatgaacacaagctaaatcatcatcagcgaattgggcta
aaatattttgaagactttgagaaaagaatccctagagaagagatgttacagatgcaggaa
attgtattgaaagaggttaagaaactggaccccgaatatattgctacagtctgtggcagt
ttcaggcgaggtgcagaatcaagtggggatatggatattctcctgacccatccaagtttc
acttctgaatcaaccaaacagccaaagcttttgcaccaagttgtagaacaactgaaaaaa
atccactttgtcacagacacattgtcaaagggtgatacgaaattcatgggtgtatgtcag
ttgccaagcgaagaagatggaaccaattatccatacaggagaattgatatcaggctgatc
cccaaggatcagtattattgtggggtactgtacttcacaggcagtgacatattcaataag
aacatgagaactcatgccctggaaatgggcttcacaatcaacgagtacacaatccggccc
ttgggagttactggagttgctggggagcccctcccagtagagagtgaaaaggatatcttt
gactacatacagtggaagtatcgagagccaaaagaacggagtgaataa
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