Mauremys reevesii (Reeves's turtle): 120397293
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Entry
120397293 CDS
T07797
Symbol
USP39
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120397293 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrv03041
]
120397293 (USP39)
Spliceosome [BR:
mrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
120397293 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
120397293
NCBI-ProteinID:
XP_039378925
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Position
LG2:complement(145348585..145378157)
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AA seq
599 aa
AA seq
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FSRLPLDGCAHASATAHACGEGYRRRWPVYAHASVAPRVRSSGWTRPGMSGRVKREREPR
ASPRSSASGRVKREPAGSRGSSRGXREAEPERVRVKREPEDGPPRAKREREAEEEPEPEP
EPTVRYGRFDPEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLVCGKYFQGR
GLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIINLD
KQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYKNIKRPP
GDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWF
LNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLQNDEYQETMVES
TFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKL
PPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHD
GKPTEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDEDETNQQGA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttctcgcgcctccctttggacgggtgtgcgcatgcgtctgctactgcacatgcgtgtggg
gaagggtacaggcgccgctggcctgtgtacgcgcatgcgtctgtcgccccgcgcgtgcgc
agtagcggctggacgcggcccgggatgtccggccgggtgaagcgggagcgggagccccgg
gcgtccccgcggagctcggcctcgggccgggtgaagcgggagccggcggggtcgcgcggc
tcctcccgagganagcgcgaggcggagcccgagcgggtccgggtgaagcgcgagcccgag
gacgggccgccccgggccaagcgggagcgcgaggccgaggaggagccggagccggagccg
gagccgacagtgagatatggccgatttgaccccgaggaccggcgcagcagacactgccca
tacctggacactattaacaggagtgttctggattttgactttgagaagctgtgctccatc
tcactctcgcatataaacgtctatgcttgcctggtgtgtgggaagtacttccagggccgt
gggttgaagtctcatgcttacattcacagcgtacagttcagccatcacgtctttctgaac
ctccacaccctcaagttctactgtctgccagacaactacgagatcattgactcctcgctg
gaggacatcacttacgtgttgaagcccactttcaccaagcagcaaatcatcaatttggac
aaacaagccaaactttcgcgggcatatgatggcaccacttacctgcctggcattgtggga
ctgaacaacatcaaggccaatgactatgccaatgcagtactccaggccctgtctaacgtc
ccacctctgcggaactacttcctggaggaggagaactacaagaacatcaagcgcccaccg
ggggacatcatgttcctgctcgttcagaggtttggagagctgatgaggaagctgtggaac
ccccgaaatttcaaggctcacgtctctccccatgaaatgctgcaggctgtggtcctgtgc
agtaagaagaccttccagattaccaagcaaggtgatggcgttgacttcctctcctggttt
ctaaatgccttgcactctgctcttggcgggacaaagaagaagaaaaagaccattgtgacc
gacgtgttccaaggctccatgcggatctttaccaaaaagcttccacaccctgacctgcca
gcagaggagaaggagcagctgctgcaaaatgatgagtaccaggagacaatggtggaatcc
accttcatgtacctgaccctcgacctccccactgccccgctgtacaaggacgagaaggag
cagctgatcatcccccaggtgccgctcttcaacatccttgccaagttcaacggcatcact
gagaaggagtataagacctacaaggagaatttcctcaagcgcttccagctgaccaagctg
cctccctacctcatcttctgcatcaagaggttcaccaagaacaacttctttgtggagaag
aaccccaccatcgtcaacttccccatcacgaacgtggatctccgggagtacctgtccgag
gaggtgcaggccgtgcacaagaacaccacctacgacctcatcgccaacatcgtgcatgat
gggaaacccaccgagggctcctacagaattcacgtgctgcatcatggcacgggcaagtgg
tatgagctgcaagacttacaggtgaccgatatcctgccccagatgataacgctctcagag
gcctatatccagatctggaagaggcgggatgaggacgagaccaaccagcagggggcgtga
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