Mauremys reevesii (Reeves's turtle): 120397850
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Entry
120397850 CDS
T07797
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrv04131
]
120397850 (VPS50)
Membrane trafficking [BR:
mrv04131
]
Protein recycling
Others
EARP complex
120397850 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
120397850
NCBI-ProteinID:
XP_039380353
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Position
LG2:46053234..46218375
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AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVNYELEKLPPVLSLQEMEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTVSSSV
SDGNNVIGAEETNFDRSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTITLFEQYCNEGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPVQSSSLSTSSREQYNARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSNDTTGTLTA
AEERKEKVPSPHLSHLVVLTSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDA
LLKEFEQFNGRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatgactcgccagggtctcaaaagtccacaggagaatgtt
catgacctcagtcctgttgagaattttcggattcctagcaaggaggagctgagagaactc
cgggaacaaccaaccgatccgcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaattatgagttggagaagcttcctccagtt
cttagtcttcaagaaatggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcagtcatttgcacaaatggaagg
aggcacctgaatattgcaaaggaaggctttactcaagctagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggactgctaaagtctctgagaacaataaagacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
cagttgtgcttggaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacagttagatgtagcc
ctctccaaaatatgcaagaactttgatatcaatcattataccaaggtgcagcaggcttac
agactacttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgtttcaagtagttcttgggtatgtagagctgtgcgcaggaaactcg
gacaccaaatttcagaagctacagtacaaggacctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctctgcaaagcactctgggaagtcatgcttagttattat
cgaacgatggaatggcatgagaaacatgaccgagatgagggaacggtttcatcttctgtt
tcagatggcaacaatgtgattggagctgaggagaccaattttgaccgtagctatgtacaa
aagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtgaaaacg
tatctgttggggacagacatgtctaacttcaaatatgatgactttatcttcgtactagat
atcattagcaggctgatgcaagttggggaagaattttgtggcagtaagtcagaagttttg
caagaatccattagaaaacaaagtgttaactatttcaagaattatcacagaactcgtctt
gaagaattaagaatgttcttggaaaatgagacctgggagctttgtcctgttaagtcaagc
tttagtattttacagcttcatgagtttaaattcatggagcagtcgcgttccccgtctgtg
tcgcctagtaagcagcctgcttcagcaatctcaacaaccataactttgtttgagcaatat
tgtaatgaaggaaatccatttgaaattcaggtcaacagcaaagatgatgagacagaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaagagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtaaaaagtgtttctcgagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgaatgcacccatcctaacaaacactacactgaacgtaataagactc
gttgggaaatacatgcagatgatgaacattctgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgcctgtacagagttcttcactttccacatctagcagggaacagtacaatgctagg
cagtttgaatcaacaggactgggtcttagtagtagcaggctacgcactacactaaacagg
atacaggagagcctgattgatctggaggtctctaatgataccactggcaccctcacagct
gctgaagagagaaaggagaaagtgccaagcccacacctcagtcatctggtagttttaaca
tctggcaatactctgtatggtttggcagagagagtggtagccacggaatccttggtgttt
ttggctgagcagtttgagttccttcagtcgcatcttgatgctgtgatgcctgcagccaag
aagccctttctccagcaattctactctcagactgtgtcaactgccagtgaactacgcaaa
ccaatttattggattgtagctgctaaagctattgattatgaacagatgctgctcctcatg
gctaatgtgaagtgggatgtgaaagagatcatgtcacaacataatatctatgttgatgct
cttttaaaggaatttgaacagtttaacggaaggttgaatgaggtgtctaaaagagtccgt
attccattgccagtgtcaaatattctttgggagcactgtatacgactagccaatagaact
attgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatgcaa
ttggacttccagcagtttttaatgaaactagaaaagctaacagacattaggcctattccg
gataaggaatttgtggagacctacattaaagcttactatctgactgaaaatgacatggag
cgctggatcaaggagcacagggaatattctaccaagcagttgaccaatctggtgaatgtt
tgtctgggatcacacatcaacaaaaaagcaagacagaaactgctagcagcaattgatgat
atagacagacctaaaagataa
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