Mauremys reevesii (Reeves's turtle): 120398865
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Entry
120398865 CDS
T07797
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120398865 (SCAF4)
03041 Spliceosome [BR:
mrv03041
]
120398865 (SCAF4)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120398865 (SCAF4)
Spliceosome [BR:
mrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
120398865 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120398865
NCBI-ProteinID:
XP_039382524
LinkDB
All DBs
Position
LG1:169677032..169750710
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AA seq
1079 aa
AA seq
DB search
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSSTAPMAENATNNEGSPPSPAKVLSEPTQVTANSVPTVSQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPVIDNTVMAQVQAITAQLKTTTTQP
PEQKAAFPPPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSISQPPFGFPGEGMP
QPVYPQLPNIDPFQPRLMGMQQDPMHHQVPLPPNGQMAGFGLLPTPQFPPMAQPVIPPTP
AVQQTFQAPFPVQSEPHIQKTHQQDMEVEQTCVQEVKRHVSDNRKSRSRSASRSPKRRRS
RSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERREREKERERRSKGLPQIKSETVSVCST
TLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNF
KVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYVPWDKVKPEDLESFCEGGMLDNETLSP
EWKGISKKSENEVAQNGGAETTHNEPVSPIPKALPVPIPVPIPAPITVPPPQVPPHPSVP
PHPSGPPVVGALQPPTFTAPLGIPPPGFGPGVPPPPPFLRPGFNPMHLPPGFLPPGPPPP
ITPPVSVPHTPGINIPNSTVAGINEDTTKDLSIGNPIPTVVSGSRGNAETSDGSKIFGTG
PPPVAPTNIPPPPVTQPIPLLGTQGVTPPAPVIGLQAPSTGLLGARPGLIPLQRPPGMPP
PHLQRFPLMPPRHMPPHMLHRGPPPGPGSFGMPPPHGMKNPFPPPGHFVRPGGIPGVGGP
GGPEDNRDGRQFRNDRQTFTPNRDQERFGRRSFGNRVENERERYGNRNDDRDHERLGNRE
RREWGRRSPERDRHRDLEERNRRSSGHRDRERDSRDRESRRDKEENRGKEKPELTDRADG
DKNHESHSGKVENADIVSELNKGESGPTGVKPDEELTSEATSSVEQAEKDTGSVVEAPR
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaacgccttcaaccaggagctcttttcactcatggagatgaaacctcct
atctcccgagcaaagatgattctcattactaaagctgccattaaagctattaagctctac
aagcatgtagtccagatagtagagaagtttatcaaaaagtgcaaaccagaatataaagtc
cctggattatatgttattgactctattgttcgtcagtctcgtcaccagtttggaacagac
aaggatgtttttgggccaagattttctaaaaatataactgccacattccagtatttatat
ctctgtccatctgaagacaagagtaagatagttcgtgtcctgaacctttggcagaaaaat
ggagtgtttaaaatagagatcattcagcctctcctggatatggcagcaggaactagtagt
acagccccgatggcagaaaatgctacaaataatgaaggttcaccaccctctccagcaaag
gttctatcggaacccacccaagtcactgctaattcagtacctactgtatcacagttgcct
agttctgatgcctttgcagctgtagctcagttatttcagacaacacaaggacaacagctt
cagcagattcttcagacttttcagcagcctccaaaaccccagtctccagtcatagataat
actgtgatggctcaagttcaggctattactgctcagttgaagactacaacaacacaacca
ccagaacaaaaagctgctttcccaccacctgagcaaaaaacttcttttgataagaagctg
ctagatcgatttgactatgatgatgagccagaagcagtagaagactcaaagaaagaggat
tcagctccgtctccttccatttctcaaccaccatttggatttccaggagaaggtatgccg
cagccagtatatccacagctcccaaatatagacccatttcaaccgcggctgatgggaatg
cagcaagatccaatgcaccaccaggtcccgctccctcctaatggacaaatggcaggtttt
ggacttctacctaccccacagtttcctcccatggctcagcctgtgataccgccaacacca
gcagtgcagcagactttccaagctcctttcccagtacagagtgaaccacacatacagaaa
acacatcagcaggatatggaggtggaacagacctgtgttcaggaagttaaacgacatgtt
tctgataacagaaaatcaagatctagatcagcatcaagatctccaaaaaggagacgatcg
aggtctggatctcgatctcgaaggtcacgtcatcgtcgctctcgttctcgatcccgggat
aggcgccgacactctcctagatctcggtcacaggaaaggcgtgaacgagaaaaagagaga
gaacgcagatcaaaaggccttcctcaaatcaaatcagaaaccgttagtgtttgtagtact
acactctgggtaggacaactagacaaaagaacaactcagcaagatgttggaagtctttta
gaggagtttggcccgattgaatctataaatatgataccgcctagaggatgtgcctatatt
gtaatggttcacagacaggatgcttaccgtgccctacaaaaactgagccgaggcaacttc
aaagtcaatcagaaatctataaagattgcgtgggctttaaataaaggaattaaaccagac
tacaagcagtattgggatgtagaattaggtgttacctacgtaccatgggacaaagtgaag
cctgaagatcttgaaagtttttgtgaaggaggaatgttggacaatgaaactcttagccca
gagtggaaaggaatttctaagaaatctgaaaatgaagtagctcaaaatggaggtgcagaa
actacacataatgaaccagtgtcacctatccctaaagcattgcctgttccaattcctgtt
cccataccggcacctataacagtacctcctccacaggttccaccacatccatcggttcca
ccacatccatcaggtcctcctgtagttggtgcacttcagcctcctactttcacagctcct
ttagggatccctcctcctgggtttggccctggtgtaccaccaccacctccatttttgcga
cctggattcaatccaatgcatttgcccccaggttttcttcctcctggaccgccacctcct
ataacccctccagtatctgttcctcacactccaggaataaatatcccaaattctactgtg
gctggcataaatgaagacactacaaaagacttatctattggaaatcccattccaactgtg
gtttctggatcgagagggaatgctgaaactagtgatggctccaaaatatttggaactggt
ccaccacctgtagcacctactaacatacctcctccacctgtcacccaacctattccactt
cttggtactcaaggggttacaccacctgctcctgtgatcgggctacaggcaccatctact
ggcctccttggtgcacggcctggtttaataccactccagcgacctccaggaatgccaccc
cctcatctacaacggtttcccttgatgccacctcggcacatgcctccccatatgttgcat
agaggtccacctccaggaccagggagctttgggatgcctccaccacatggaatgaaaaac
ccttttccaccacctggtcactttgtcaggcctggtgggataccaggagttggaggacca
ggtgggcctgaagataatagagatgggaggcagtttaggaatgataggcagacattcact
cctaatagagaccaggaaagatttggaaggaggtcttttggaaaccgggtagaaaatgag
cgtgagcgctatggtaaccgcaacgatgatagagatcatgagcgacttggtaatcgtgaa
aggagagaatggggaagaagaagccctgaacgtgatagacatagagacttggaagagaga
aatagacggtccagtggacaccgagacagagagagagattctagagatagggagtctcgt
agagacaaggaagaaaatcgaggaaaggaaaaacctgagctgacagacagggcagatggt
gacaaaaaccatgaatctcatagtggcaaagtggaaaatgcagacattgtttcagaactt
aataaaggggagtctggacctactggtgtaaaacctgatgaagagttaacatctgaggct
acctcatcagttgagcaagccgaaaaggataccggctcagttgtagaggctcctcgctag
DBGET
integrated database retrieval system
