Mauremys reevesii (Reeves's turtle): 120400010
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Entry
120400010 CDS
T07797
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120400010 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrv03041
]
120400010 (CDC40)
Spliceosome [BR:
mrv03041
]
Complex C
Other components
Step II factors
120400010 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
120400010
NCBI-ProteinID:
XP_039384274
LinkDB
All DBs
Position
LG3
Genome browser
AA seq
658 aa
AA seq
DB search
MPPTSPALSAPQKLALPPGLYESEVQTAPSKRLSPLERIVVEGGGPEPGASWGGSSGAEL
PKGFTIDTERRVCARGRRSFSPGPDSLSKHAGAVYPTPNRPSPLPPGTKWVPLPPASVGL
RIREPPFPHTPPQYGSTSVVFQEDVETGVHLDPAIKEVQYNPTYDTMFAPEFGPENPFRT
QQMAAPRNMLSGYAEPTHINDFMFEQQRRTFATYGYALDPSLDTQDVATKYIGSVEEAEK
NQGLTVFETGQKKIEKRKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITA
KRQKKGKHEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQL
HVWSGHTKGVSAVRLFPLSGHILLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFN
NAGTQFLSAAYDRYLKLWDTETGQCVSRFTNRKVPYCVKFNPDEDKQSLFVAGMSDKKIV
QWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSM
HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS
YVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaccagccccgccctctcagcgccccagaagctcgcgctgccccctggtctg
tacgaatccgaagttcaaacggctccttccaagcgcctctccccgctggagagaatcgtt
gtggaggggggaggacccgaacccggcgcgagctggggggggagcagcggcgcggagctc
cccaaaggcttcacaatagacacagagcggcgcgtgtgtgcgcgtgggaggaggagcttc
tcccccggcccggactccctctccaagcacgcgggggctgtttacccaacgcctaaccgg
ccgtcgccgcttccccccgggactaagtgggtgcctcttccccccgcatccgtggggttg
aggatcagggaacccccatttccacacaccccccctcaatatggcagcacttctgttgta
tttcaggaagatgtagagacgggagtccacctcgatcctgcaatcaaggaagttcagtac
aatcccacttacgacaccatgtttgcaccagagtttggtccagaaaacccgtttaggact
cagcagatggctgcacctaggaatatgctttctggatatgcagaaccaacacacatcaat
gatttcatgtttgaacaacagagaagaacatttgcaacttatggttatgcattagatccc
tctctagatactcaggacgttgctactaaatacattggttctgtagaagaagctgaaaaa
aatcaaggtttaacagtatttgaaacaggacaaaagaaaatagaaaaaaggaagaaattc
aaggagaatgatgcatctaatattgatggcttcttgggaccatgggcaaaatatgtggat
gagaaagaagtagcaaagccctcagaagaagagcagaaagagttggatgaaataacagca
aagaggcagaagaaaggcaaacacgaagatgataaacctggcgaggagaagactatctta
catgtcaaagaaatgtatgactaccagggaagatcctatcttcatgttcctcaagatgtt
ggcgttaatctccgttctacagtgccccctgagaaatgctatctcccaaagaaacagctc
catgtatggtctggacatacaaagggtgtcagtgcagtcaggttgtttccactctctggc
cacatattgctatcttgctccatggactgtaaaattaaactatgggaagtatacggtgaa
cgaagatgcttacgaacatttattgggcacagtaaagcagttcgagacatctgctttaac
aatgctggaactcagtttcttagtgcagcatatgaccggtatcttaaactctgggacact
gaaacagggcaatgtgtttccaggttcacaaacaggaaggttccatactgtgtcaaattc
aatcctgatgaagataaacaaagtctttttgtggcaggaatgtcagataaaaaaattgta
cagtgggacattcgaagtggggagattgtgcaggagtacgataggcatttgggagctgtc
aacaccattgtgtttgtggatgagaatagacggtttgtgagtacatctgatgacaagagt
ttaagagtctgggaatgggacattcctgtcgatttcaagtacatcgcagagccaagtatg
cactcgatgcctgcagtcaccttgtctccaaatggaaaatggctggcttgtcaatcaatg
gataatcagattttgatttttggagctcagaacagattcagattaaacaaaaagaaaatc
ttcaagggtcacatggtggcaggttatgcttgtcaagttgatttttcacctgacatgagc
tatgtgatatcaggtgatgcagatggaaaacttaacatctgggactggaagaccacaaaa
ctctacagtaggttaaaggcacatgacaaagtttgtataggcgcagtctggcatccacat
gaaacatctaaggtcatcacctgtggctgggatggtcttattaaattgtgggactga
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