Mauremys reevesii (Reeves's turtle): 120400342
Help
Entry
120400342 CDS
T07797
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03008
Ribosome biogenesis in eukaryotes
mrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120400342 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
120400342 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120400342 (XRN2)
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120400342 (XRN2)
03009 Ribosome biogenesis [BR:
mrv03009
]
120400342 (XRN2)
03016 Transfer RNA biogenesis [BR:
mrv03016
]
120400342 (XRN2)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120400342 (XRN2)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
120400342 (XRN2)
Ribosome biogenesis [BR:
mrv03009
]
Eukaryotic type
Pre-60S particles
RNases
120400342 (XRN2)
Transfer RNA biogenesis [BR:
mrv03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
120400342 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
120400342
NCBI-ProteinID:
XP_039384709
LinkDB
All DBs
Position
LG3
Genome browser
AA seq
958 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNSVEEKPKECNGIKIPVDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGVEGAEEKQRIRQEILTKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYVAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCQGLPREKQGEHDQFADCPPGSEQE
FIFIRLSVLREYLEKELTMASLPFTFDIERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVGIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEENFRRRQKE
KRKRMKRDQPSFIPGGQFSPQALGRGNRSSPQAISNPRQTAYEMRMQDKQNSTPSSSPNT
SFTSDGTPSPAGGIKRKAEDSDSEPEPEDNIRLWESGWKQRYYKNKFDVDVSDEKFRRKV
VQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADLPSDFEKGTKPFRPLEQL
MGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKFAWQGVALLPFVDERRL
RAALEEVYPDLTPDENRRNSLGGDVLFVGKHHLLCDFVLELYKSSSSEPVDIPPELCHGI
QGKLTLNENAVLPDQTVESPVPLLRDLTQNSAISINFKDPQFQEDFVFKAVVLPGAKKPA
PVLKPGDWEKTNNNGRPWRPQLGFNRDRRPVHLDQSAFRTLGHAMSRERGQSGSGVYSNA
APLGAYQGNPYRPLLGGQPQIPKLLSNLRPQESWRGPTPLFQQPPQRYERNSGAAPLISW
NRMLQSQGAAFQQNQYQGVGGPMNYPHRPDDRMDRGRQGYGPGRPYPLPPPAGRYNWN
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggccttcttccgctggctcagccgcaagtacccctccatcatcgtcaac
agcgtggaggagaagcctaaagaatgcaatggcatcaaaattccagttgataccagcaag
cctaatcccaatgaggtggagtttgataacctgtatttggatatgaatggtattatccat
ccatgtacacatcctgaggacaaaccagctcccaaaaatgaagatgaaatgatggttgcc
atttttgagtacattgacagacttttcaacattgtcaggccaagacgacttctctacatg
gcaatagatggagtagctccccgtgcaaaaatgaatcagcagagatccaggagattcaga
gcgtcaaaggagggagtggaaggtgcagaagagaagcaaagaataagacaagaaattttg
acaaaaggtggctttcttcctccagaagaagtgaaagagagatttgacagcaattgtatt
acaccaggaaccgagtttatggacaatcttgctaaatgccttcgctattacgttgctgat
cgtttaaacaatgacccagggtggaaaaatttgacagttattttatctgatgcgagtgct
cctggtgaaggggaacacaaaatcatggattacattagaagacagagagctcaaccaaac
catgacccaaacactcatcattgtttgtgtggggctgatgctgatctgatcatgcttgga
ctagctacacatgaaccaaacttcactataatcagagaagagtttaaaccaaataaaccc
aaaccttgtggtctttgtaatcagtttggccatgaggttaaggattgtcaaggcttgcca
agagagaaacaaggagagcatgatcagtttgcagattgtcctcctggctctgaacaagag
tttatctttatccgattaagtgtgctgcgagagtatttggaaaaagaactaactatggcc
agtttaccttttacttttgatattgagagaagcgtagatgactgggtcttcatgtgtttc
ttcgtggggaatgactttcttcctcatttgccatctttagagatcagggagggagcaatt
gatcgtctggttggcatatataaaaacgtggtgcacaaaactggggggtacctcacagag
agtggttatgtcaacctccagagagtacagatgatcatgttggctgttggagaagttgaa
gatagcatttttaaaaagaggaaagatgatgaggagaacttcagaagacgacaaaaagaa
aaaagaaaaagaatgaagagggatcagccttcttttattcctggtggccagttttcccct
caagctttggggagaggaaatagatctagtcctcaggcaatcagtaaccccaggcagaca
gcctatgaaatgagaatgcaagacaaacagaactcgactccttcttcatctcctaatact
agtttcacttctgatggcaccccgtcccccgcaggaggaattaagcgcaaagcagaagac
agtgacagtgaacctgagccagaggataatatcaggttatgggaatctggttggaaacag
cgctactataagaacaaatttgatgttgatgtgtctgatgagaaattccgtcgtaaagtt
gtacagtcttatgttgaagggctttgctgggttctcagatactattatcagggttgtgct
tcctggaagtggtactatcctttccattatgcgccatttgcctctgactttgaaggtatt
gcagacctgccctcagactttgagaagggtacaaaaccgttcagaccacttgaacaactc
atgggagtatttcccgctgctagtggtaactttctaccaccaacatggcggaagctcatg
actgatccagaatcaagtataattgacttctaccctgaagattttgctattgatttgaat
gggaagaaatttgcttggcaaggcgttgctctgttgccattcgttgatgagcgccgtctg
agagctgctctggaagaggtttaccctgacctcactcccgatgaaaacagaagaaatagt
cttggtggcgatgttctgtttgttggaaaacatcacttgctttgtgactttgttttagaa
ctgtacaaatccagtagctcagagccagtggatataccccctgaactgtgccatggaatc
cagggaaaacttactctgaatgaaaatgcagttcttccagatcagacagtagagtctcct
gttccattgttgcgtgatctgacacagaattctgccatcagtatcaatttcaaagatcca
caatttcaagaagactttgttttcaaggctgtagtattacctggagcaaaaaaacctgca
ccagttctgaagccgggtgactgggaaaaaaccaacaataatggcaggccttggagaccc
cagcttggttttaatcgcgacagaaggccagttcatttggaccagtcggcattcagaact
ttaggccatgcaatgtcacgggaaagaggacagtcaggaagtggagtctacagtaatgca
gcaccacttggggcttatcagggaaacccatacagaccacttctaggtggccaaccacag
attcctaaattgttgtcaaatctacggccccaagaatcatggcgaggtcccacacctctg
tttcaacagccgccacagagatatgaaagaaattctggggctgcccctcttatatcttgg
aaccgcatgctgcaatcccagggtgcagcattccagcaaaatcagtaccaaggagtaggt
ggaccaatgaattacccccacagacctgatgatcgaatggataggggaagacagggatat
ggccctgggaggccctaccctttgccacctcccgctggaagatacaactggaattag
DBGET
integrated database retrieval system
