Mauremys reevesii (Reeves's turtle): 120401106
Help
Entry
120401106 CDS
T07797
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120401106 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120401106 (NUP98)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120401106 (NUP98)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120401106 (NUP98)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120401106 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120401106
NCBI-ProteinID:
XP_039386697
LinkDB
All DBs
Position
LG1:11735368..11794030
Genome browser
AA seq
1819 aa
AA seq
DB search
MFNKSFGTPFGGSAGGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGSLFGNTQTKPG
GLFGSSTFSQPATSSTSTGFGFGTSTGTSNSLFGTASTGGGLFSSQNNAFAQNKPAGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPAVAAAGLFGSSTATSSAATGL
FGSSTTNAGFSYGQNKTAFGASTTGFGTGTAGSLFGQQPQQTTSLFSKPFGQATTTQNTG
FSFGNTSTLGQPNTNTMGLFGATQASQSGSLFGTAANTNAATGFGTGTGTGLFGQANTGF
GVGGSTLFGKPAGFGTTTTSAPSFGTTTGSGLFGNKPTLTLGTNTNTSNFGFGASTAGNS
IFGNKPAAGTLGAGLGTGFGTALSAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLG
FGAPQPAVALTDPNVSAAQQAALQQHFNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNP
AAQKALTTPTHYKLTPRPATRVRPKALQTAGSSKSHLFDGLDDDEPSLSNGAFMPKKSIK
KLVLKNLNSSNLFSPVSREAEDLEPPSEYPENGERFNFLSRSVDENHRQEGEREEEDDHH
EVTRFYTNPIAKPIPQTPENAVHKHQNNVDDTIVALNMRVALRNGLEGSSEDASFHDESL
QDDREEENENVYSLHPAGIVLTKAGYYTIPSMEDLAKLTTDRGECIVTDFTIGRKGYGSI
YFEGEVNLTNLNLDEIVHIRRKEVIVYPDDDQKPPIGEGLNRRAEVTLDGVWPTDKTSRC
LIKSPERLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEH
PSKADAKKLKTAQVPPQGQLVPQQMALNGKPTPPSQSPEVEQLGRVVELDSDMADITQEP
AQDSVLEDSITEEPELVPASTHIASSLGINPHVLQIMKASLLADEEDVDLILDHHFGKQP
TKMDTSQEICSPRLPISALQGQKRHSSVGGLLQSKFASVSFLQSASLPDFHGPRTSSLGN
PPSAASWSGLSPLPSAFSMPSAAPEVPLKTVGACRQQGLIPLEKSVTYGKGRLLMDMALF
MGRSFRVGWGPNWTLVNSGDKLSGSSEPKDLRNDSMEYGFLPTPVAPKSLSESPFKVHIE
KLTLEQRKTDGDQQLYLIPLEIKLKHSTVHVDERCPLIAANPGVSAIHDYADWVRDFCGD
SAEIESVVKYWCLTWMLCEAIWGHLKELEASLEEPSEYIVTLERRKAFSRWLSQTAAARI
EEEVSLSQHENHIEAVFSYLTGKRISEACRVAQQSGDHRLALLLSQLVGSQQVRELLTMQ
LVDWHGLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRSIAIHLWYLLPP
TASISKALNMYEAAFQNTPECEKYACCPLPPYLEDSGCVLEEDDSTKRPLRDVCFHLLKL
YSDRCYDLNQLLDPRSITSDPLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASYAAQLES
EGLWEWAIFVLLHTSNTHTREKAVREFLNRHCVLSETPESWTRETFLTQKLCIPPEWIHE
AKAVRARMEGDKHKEALYLFKAGHWNQCHKLVIRHLASDAIINENYNYLKGFLEDLSPPE
RSTLIQDWDTAGLVYLDYIRVIEMLDRIQQLDCSAYELERLHTKVTSLCNRIEQIQCHNA
KDRLAQSDMAKRVANLLRVVLSLQHSPEPASDSTPDVQRVPLRLLAPHIGRLPMPEDYAL
EELRSLTQSYLRELTVVTQ
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaactccatttggaggcagtgctggtggctttgggactact
tcaacatttggacaaaatgcaggctttggtactaccagtggaggagcgtttggaacatca
gcctttgggtcaaacaataacacaggaagcctctttgggaacacacagactaaaccagga
ggattgtttggttcaagtacatttagccaaccagccacctcctccacaagcactggcttt
gggtttggaacatcaactggaacttccaacagcttgtttgggactgccagcactggtgga
ggtctcttttcttcccagaataatgcctttgctcagaataaaccggctgggtttggaaac
tttggaacaagtaccagcagtggaggtctctttggaaccactaacactgcctccaaccct
tttgggggtacatctggctctctctttgggccaactagctttactgctgctccaactggg
actaccattaaatttaatccaccaaccggcacagatactatggtaaaatctggagttagc
actaacatcagcactaagcaccagtgtattactgctatgaaggagtatgaaagcaaatcc
ctagaggaactccgtttggaagattaccaggcaaacaggaaagggccctcaaatccagcg
gtagcagcggcggggttatttggatcctccacagctacatccagtgcagctactggactg
tttggctcctccaccactaatgcaggtttttcatacggacagaataaaacagcttttgga
gccagtacgactggctttggaacaggaacagctgggagcctttttggtcagcagcctcag
cagactaccagtctcttcagcaaaccatttggccaggccaccacaacgcagaacactggc
ttttcttttgggaacaccagcactcttggacaaccaaatacaaacacgatgggtttattt
ggggcaacccaagcctcgcagtctggaagcctttttggcacagctgccaacacaaatgct
gccactggatttggaacgggaacgggaactggtctctttggacaagccaacacaggattt
ggtgttggcggttcgaccctgtttggtaagcctgctggatttggaaccaccacgaccagt
gctccttcgtttggtacaactactggcagcgggctctttggtaacaaaccaaccctgact
ttaggaaccaatacaaacacttccaattttggttttggtgcgagcactgctgggaatagt
atctttggaaataagcctgcagctggaactctcggcgctggacttggaacaggatttgga
acagctcttagtgcagggcagacttcactattcgggaacacccagcctaaattaggtgga
acactgggaacaggagcatttggagcgcctggattcaatacatcaacagccaccctgggc
tttggagctccccagcctgctgtggcattgacagacccaaatgtttcagctgcccaacaa
gcagctctccagcagcacttcaacagcttgacctactcgccctttggagattctcctctc
ttcagaaaccctatgtctgacccaaagaagaaagaagagagactgaaaccaactaatcca
gcagcccagaaggctttgactacgccaacccattacaaactgaccccacgaccagcaacc
agagtgcgaccgaaagctttgcagacagcaggatcttccaaatctcacctctttgatggg
ctggatgatgacgagccgtctctatctaacggtgcattcatgcccaagaagagcatcaag
aaactggttttgaaaaacctcaacagcagcaacttgttttctcctgtcagtcgtgaagct
gaagatctggaacctccatctgagtatccagagaatggagagcggttcaactttctgtcc
agatctgttgatgagaaccacagacaggagggtgagcgagaggaagaggacgatcaccat
gaagtgactagattttacactaacccgatagccaaacccatcccacagaccccagagaat
gcagtgcacaaacaccagaataatgtggatgataccattgtggctctaaatatgcgggtt
gccttgcggaatggcctggaaggcagcagtgaagatgcttcatttcatgatgagtcgctg
caggatgaccgtgaagaagagaatgagaatgtttatagtctgcacccagcaggaattgtt
ctaacaaaagctggctactacaccatcccgtctatggaggatctagctaaacttaccact
gacagaggagagtgtattgtgactgatttcactataggtcgtaaaggttatggatcaatt
tactttgaaggagaggtaaatctaactaacttaaatctggatgagattgtgcacatccgc
aggaaagaagttattgtctatcctgacgatgatcagaagccacctattggtgaaggttta
aatagacgagctgaagttacattggatggagtttggccaacagataaaacatctcgatgc
ttgataaagagcccagagcgactagcagatatcaattatgaaggcagactggaggctgta
tctcggaagcagggagcccagttcaaagaataccgtccagagactggttcttgggtgttc
aaggtggctcacttctccaaatatggcttgcaagattctgatgaggaagaggaggagcat
ccttcaaaagcggacgcaaagaagttaaaaactgcccaagtgccaccccaggggcagctg
gtgccccaacaaatggctctaaatggcaagccaacgcctccatctcagagcccagaagtg
gaacagctgggaagggttgtggaactggacagtgatatggctgacatcacccaggaacca
gctcaggattcagtactagaagatagcattacagaagagccagaactggtgcctgcttca
acgcacattgcatcttcacttggtataaacccccatgtcttacagatcatgaaagcttcc
ttgctcgctgatgaagaggatgtagacttgatcctggatcatcactttggcaaacagcct
acaaaaatggatacttctcaagagatctgctctcctaggcttcctatttcagcattgcaa
ggacagaaaagacactcctcagttggagggctgctgcaatcaaaatttgcaagtgtgtct
ttcctccaaagtgcttctctgccagattttcatggaccaagaacttcctctttaggcaat
cctccatctgcagcctcttggtctgggctttccccactaccctctgcattctccatgccc
agcgcagccccagaggtgccgctgaaaacagtgggtgcctgtaggcagcaggggctaata
cctctggaaaaatctgtcacttatggaaaaggaagactcctaatggatatggcactcttc
atgggacgctcatttcgtgttggttggggacccaattggactcttgtaaatagtggagat
aaactgagtggatcaagtgagcccaaggatcttcgcaatgactctatggaatatggattc
ttgccaactcctgttgctcctaaatcactttcagaatctcccttcaaggttcatatagag
aagctgaccttagaacaaaggaagacagatggagaccagcagttatacctcatccctctg
gagataaagctcaaacacagtactgtccatgtagatgaacgttgtcctctcatagcagcc
aacccaggagtgtctgccattcatgactatgctgactgggttagagacttttgtggagac
tcagctgaaatagaatctgtggtgaagtactggtgtttgacatggatgttgtgtgaggca
atctggggccacctgaaggagttggaagccagcttggaggagcccagtgagtacattgta
accctggagcgcaggaaagccttctcccgctggttatcgcagactgcagcagcacgaatc
gaagaggaagtctcactgtcccagcatgagaatcacatagaggctgtgtttagctacctt
actgggaagaggatcagtgaggcttgtagggtggcacagcaatcaggagatcacaggctt
gccctactcctctcccagttggtaggcagccagcaggttcgggagctcctcacaatgcaa
ttagtggactggcacggattgcaggcagactgcttcatccaggaggagagattgcgcatc
tttgctctgctggctgggaagcccgtgtggcagttatctgagagaaaaagcattaatgtg
tgctcacagctggactggaagcgttctattgctatccacctctggtatctgcttccacca
acagcttctatttcgaaggcactcaacatgtacgaggcagcattccagaacaccccggag
tgtgagaaatatgcctgctgtcccctgcctccctacctagaggattctggctgtgtactt
gaggaagatgacagcacaaagagacccctgagagatgtctgctttcacttgttaaagctc
tacagtgacagatgctatgatctcaatcagctgcttgaccccagaagtattacttccgac
cccttggactaccgtcttagttggcacctgtgggaagtactcagagccttgaattacact
catctatcagagcagtgtcaaggagtgctgaatgccagctatgctgcccagctcgaaagt
gaaggactctgggaatgggccatttttgtactgctgcatacatccaatacacacacacgt
gagaaagcagtgcgtgaattcttaaaccgccactgcgtgctgtcagaaacgccagaatcc
tggacaagggagactttcctgacacaaaagctctgcattccaccagaatggattcatgaa
gctaaggcagttcgggcaaggatggagggagataagcataaagaggccctctacttgttc
aaagctggacactggaaccagtgtcataaactggtcatcaggcacttagcctcagatgct
attattaatgaaaactacaactacctgaaaggattcctagaagatttgtcccctccagaa
cgaagtacactcatccaggactgggacacagcggggctggtttatttggactacatccgg
gtcatcgagatgcttgacaggattcagcagctggattgttctgcatacgagttggagagg
ctacataccaaagtgacatctctatgcaataggatagaacagatacagtgccacaatgcc
aaggaccgattggctcagtctgatatggccaaacgtgttgctaacctgctgcgggtggtc
ttgagcctacagcattctcctgaacctgcctctgactccacgcccgacgtgcagcgagtc
ccacttcgcctgcttgctccccacattggccggcttcccatgccagaggactatgccttg
gaggagctgcgcagtctcacacagtcgtatctacgagaactgactgtggtgactcagtga
DBGET
integrated database retrieval system
