Mauremys reevesii (Reeves's turtle): 120401284
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Entry
120401284 CDS
T07797
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120401284 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120401284 (CPSF3)
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120401284 (CPSF3)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120401284 (CPSF3)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120401284 (CPSF3)
U7-dependent histone pre-mRNA processing factors
120401284 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
120401284
NCBI-ProteinID:
XP_039386959
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All DBs
Position
LG3
Genome browser
AA seq
691 aa
AA seq
DB search
MSAKRKAEAMIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADK
KPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYSGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVHKIAKKVDMDAFSKRMEIMLQDMFGEDCVTAKDGSVLSVTVDGKTANISLDTRTA
ECEPGNEDDESLREMVELAAQRLYDALSPVH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagagaaaagccgaggccatgatcccggccgaggagagcgaccagctgctc
atccggcccctaggtgctgggcaagaagtaggaagatcatgcattattctggagtttaaa
ggaagaaaaataatgcttgattgtggaatccaccctggcctagaaggaatggatgcccta
ccttacattgacttgatagatcctgctgagattgatctcctcttaatcagtcatttccat
ttggatcactgtggcgctttaccatggtttctgcagaagaccagcttcaaaggaagaaca
tttatgactcatgctacaaaagctatttacaggtggcttctttcagattatgtcaaggtt
agcaatatttcagcagatgacatgctgtacacggagacagatctggaagaaagcatggac
aaaattgaaaccatcaactttcatgaagtaaaagaggtggcaggaatcaagttctggtgt
taccatgcgggccatgtcctgggagcagccatgtttatgattgaaatagctggtgtgaag
cttttatatacaggtgatttctcaagacaggaagacagacacttgatggcagctgagatt
cctaatattaaacctgatattcttatcattgaatccacctatggtacccatattcatgaa
aaaagggaagagcgagaagcaagattctgtaacactgttcatgatattgtaaacagagga
ggtagaggtcttattcccgtctttgccttgggtcgagctcaggagctgcttttgatctta
gatgaatactggcagaatcaccctgaactccatgacatcccaatatactatgcctcctct
ttggcaaagaaatgcatggcagtgtatcagacatatgtaaatgctatgaatgacaagatc
cgcaagcaaatcaacatcaacaatccatttgttttcaaacacattagtaatctgaagagt
atggatcactttgatgacattggccccagtgttgttatggcttccccaggtatgatgcag
agtggcttatccagagaattgtttgagagctggtgtactgataagagaaatggagtaata
atagcagggtactgtgttgaaggaacacttgccaagcacataatgtctgaacctgaagag
atcacaactatgtcagggcagaagctcccactgaagatgtctgtagactacatttctttc
tctgctcacacggattaccaacaaaccagcgagtttatcagggcactgaaacctccgcat
gtgattttagtgcatggtgagcagaacgaaatggccagattgaaagcagcattgatacga
gaatatgaggataacgatgaagttcacatagaagttcacaatcctaggaatactgaggct
gtgacattaaacttcagaggagaaaaacttgccaaggtgatggggtttttagcagataaa
aagccagagcaaggacagcgagtttcagggatcctggttaaaagaaactttaactatcac
atcctttctccatgtgacctctccaattacactgatttggctatgagcactgtaacacag
acacaagccattccatattctggtcctttcaatctgctttattaccagctacagaaactg
acaggtgatgtagaggaaatcgaaatccagcaaaagccagccttgaaggttttcaaaaat
attactgtgatccaggaacctggcatggtggtacttgagtgggtggcaaatcctgcaaat
gatatgtatgcagacactgtaacaacagtgatcctggaagttcagtcaaatcccaaaata
cagaaagctgcagtgcataagattgccaaaaaagtagatatggatgcatttagcaaaagg
atggagatcatgcttcaggacatgtttggagaggactgtgttactgcaaaagatggctct
gttctaagtgtcacagtggatggaaagactgcaaatatttccttggacacacggacagct
gaatgtgagccaggaaatgaagatgatgaatcccttcgggaaatggtggagttggctgca
cagagactctatgatgccctcagcccagtccattga
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