Mauremys reevesii (Reeves's turtle): 120401727
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Entry
120401727 CDS
T07797
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120401727 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrv03400
]
120401727 (MSH2)
DNA repair and recombination proteins [BR:
mrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120401727 (MSH2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
120401727
NCBI-ProteinID:
XP_039387859
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Position
LG3:complement(33927682..34026205)
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AA seq
942 aa
AA seq
DB search
MAAAAAAAPGSAAESLWPEGSGAEGGFVRAVLALPEKPDTTVRFFERGEHYTVHGGDALL
AARELFRTRGVIRQLAGGPGNQKLESVVLSKMNFESFLRDLLLVRQYRVEIYKNKAGSKS
TKENDWYLAYKGSPGNLAQFEEILFGNNDMSTAIGVVGVKLCTADGQRIVGVGYVDATLR
KLGVCEFPDNDQFSNLEALLVQIGPKECVLPGGETAGDMGKLRHIIQRGGIMITDRKKAE
FTTKDIVQDLNRLLKSKKEEQVTSATLPEIEKQVAVSSLSAVIKYLELLSDESNFGQFEL
TSFDLSQYMILDNAAVRALNLFQSSGENANSTQSLVGLLNKCKTPQGQRLVNQWIKQPLT
DKNRIEERLNLVEAFVVDTELRQCLQEELLRRFPDLNRLAKKFQRQVATLQDCYRMYQAI
NQLPNVVQALEKHEGAHQMLLLAVFVMPLNDLNSDFSKFQEMIETTLDMNKVENHEFLVK
ASFDPNLTELREKMNKLEESMQSLLKTAARELGLEAGKNIKLDSNSQLGHYFRITCREEK
VLRNNAKYKILDTQKNGVKFTNSNLSSFNEDYIRSREEYEEAQEAIVKEIINIASGYVEP
IQTMNDVIAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGSRHPCIEVQDDIAFI
PNDVNFEKGKQMFHIITGPNMGGKSTYIRQAGVIVLMAQIGCFVPCDSAEVTIVDCILAR
VGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIA
CKICAFCMFATHFHELTALANQVPTVNNLHVTALTTDEMLTMLYRVKKGVCDQSFGIHVA
ELAAFPKHVIESAKEKALELEEFQTIGKPEESEGEPAAKRRYREKEEGEKIIQDFLCKVK
ALPLRDMSEEDIRTKLKQLKAEVLAKNNGFVNEIVSRTKVTP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcgcctgggtctgcggcggagtcgctgtggccggagggc
tcgggcgccgagggcgggttcgtgcgcgcggtgctggcgctgcccgagaagcccgacacc
accgtgcgcttcttcgagcgcggcgagcactatacggtgcacggcggggacgcgctgctg
gccgcccgcgagctcttccgcacccgcggcgtcatccggcagctggcggggggcccaggc
aatcagaaacttgagagtgttgtgcttagtaaaatgaactttgaatcttttctgagagat
ctacttctggttcgtcagtacagagttgaaatttataagaacaaagcaggcagtaaatct
accaaagagaatgactggtatttggcatacaagggttctccaggtaaccttgcccagttt
gaggaaattctctttggcaataatgacatgtcgactgccattggtgttgtgggtgttaag
ctatgtactgctgatggacaaagaatagttggagttgggtatgttgacgctacgctcagg
aagctgggtgtctgtgagtttccagataatgatcagttctcaaaccttgaagctctgctg
gttcaaattggacctaaggaatgcgtgctacccggaggagagactgctggggatatggga
aaactgcgacacatcattcaaagaggaggaatcatgattacagaccgaaaaaaggctgaa
ttcacaacaaaagatattgtgcaggatctcaaccgcttgctgaaatcaaaaaaggaagag
caagtgactagtgcaacgttaccagagatagaaaaacaggttgctgtttcatccttgtca
gccgttatcaagtatttagagctcttgtcggatgaatctaacttcggacaatttgaattg
actagctttgacctcagtcagtatatgatactggataatgcagctgttcgagcccttaac
cttttccagagttctggtgaaaatgccaacagtacacaatcattggttgggttattaaat
aagtgcaaaactcctcaaggacaaagactggttaatcagtggatcaaacagccacttacg
gacaagaacagaatagaagaaaggttaaatttggttgaggcctttgtggtagacacagag
ctacggcagtgccttcaagaagagcttctacgtcgttttccagatctcaaccggctagcc
aagaaatttcaaagacaagtagcaaccctgcaagactgttaccgaatgtatcaagctatt
aaccaactgcctaatgttgtacaggcactggaaaaacatgaaggagcacaccagatgttg
ttgctggcagtatttgtaatgcctcttaacgatctcaactctgacttctccaagtttcag
gaaatgatagaaacaactttagacatgaacaaggtggaaaatcacgaattccttgtgaag
gcttcttttgatcctaatctgaccgagttgagagagaagatgaacaaactagaggagagc
atgcaatctcttctaaagactgcagccagagaactaggcttggaagctggcaagaacatc
aaattggactccaattcacaattaggacattacttccgaattacctgccgggaagaaaaa
gtcctccggaacaatgcaaaatataagatcttagatactcagaagaatggtgtgaaattc
acaaatagtaatttgagctccttcaatgaagactacataagaagcagagaagagtatgaa
gaggctcaggaagccattgttaaagaaatcattaatattgcttcaggatatgtagagcca
atacagacaatgaatgatgtgatagctcagttagatgctgttgtcagttttgctcatgta
tcaaatggagcacctgtgccgtatgtacgtccggtcattctggaaaagggacaaggaaga
attgtgctgaaaggttccagacacccttgcattgaagttcaagatgacatagcattcatc
cccaatgatgttaactttgaaaagggcaagcagatgttccatattattactggtcctaac
atgggagggaaatcaacatacattcgtcaggctggagtgatagttctaatggcccaaatt
gggtgctttgtaccatgtgactcagcggaagtgactattgtggattgtattctggctcgg
gtaggagcaggagacagtcagttgaaaggtgtctcgactttcatggcagaaatgttagaa
actgcttcaattcttcggacagcatctgaaaactctttaataatcattgatgagttggga
agaggaacttcaacatatgatggatttgggttggcatgggctatttcagaatatatcgcc
tgcaaaatttgtgccttctgtatgtttgctacgcattttcatgaactgacagcacttgct
aaccaagtgccaactgtgaataatttacatgtcaccgcactaaccactgatgagatgctg
actatgctttaccgtgtcaagaaaggtgtctgtgatcagagttttggaatacatgtagca
gagcttgctgcttttccaaagcatgtaatagagagtgcaaaagagaaggctctggagcta
gaggagttccaaactattggaaaacctgaggaatctgaaggagaaccagcagctaagaga
cgctatagagaaaaagaggaaggtgaaaaaataattcaggatttcctttgcaaagtgaaa
gcattgcccttgagagacatgtcagaggaagacatcagaaccaaactgaaacaattgaaa
gctgaagtgctggcaaagaacaacggttttgtgaatgaaattgtttcccgaacaaaagtt
actccatga
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