Mauremys reevesii (Reeves's turtle): 120402860
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Entry
120402860 CDS
T07797
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120402860 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120402860 (PAN3)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120402860 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
120402860 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
120402860
NCBI-ProteinID:
XP_039389253
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Position
LG1:50298623..50410075
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AA seq
765 aa
AA seq
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MQYILKRERVCGKHLERTYFEVPGIDGSGLADASLTDSYFSTSFIGVNGFGSPAEAKYPM
MQRMTNSSSSPSLLNDSAKQYAGHDPLTSPASSLFNDFAALSLSQRRKPRKYRLGMLEER
IVPVGSKARKSKNAIGCLADRCKTGVPINMVWWNRVTENNFQTPNPTASEFIPKGGSTSR
LNNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRS
HTPNPANYMVPTSASTPVTNAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNY
HIYPPTAPHVAYMQPKANAPSFFMTDELRQELINRHLITMAQIDQADIPAVPTEVDSYHS
LFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWK
KIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAYFTKRKWGQHD
GPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVGV
FDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENLQKAMELVTINYS
SDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFR
LLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKL
DAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatatcctgaagagagagagagtttgtggcaagcacttggagagaacatatttt
gaagttcctggaatagatggcagtggtttagctgatgctagtctcacagattcctacttt
agtaccagcttcattggcgttaacggatttggaagtcctgctgaagcaaaatatcccatg
atgcagaggatgacaaatagcagcagttcccctagccttctcaatgacagtgccaagcag
tatgcaggccatgacccactgacttcaccggcttcatccttgtttaatgactttgctgcc
ctcagtttatctcaaaggagaaagccaaggaagtatcgactggggatgctggaggagagg
atagttccggtgggatcaaaggcacgaaaatcaaagaacgctattggctgtctggctgac
aggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaat
tttcagacaccaaatcctactgcaagtgagtttattccgaaaggaggatcaacttccagg
ctgaataatgtgtctcagtcaagtatgtctgccttctctcaagccttgttttctcacccc
tccatgggaagtcctgctactgctggactagctccaggaatgtcactgtctgcaggatct
tctcctcttcactcccctaaaattactcctcacacatctcctgctcctagaagaagaagt
catactccaaacccagcaaattatatggtgcctactagtgcctctactcctgttactaat
gctgtctcccagcctccatctactggccaggtgattcagaaggaaactgtgggtggaaca
acatatttctacactgatacaactccagcccctctcacaggaatggtatttccaaactat
cacatttaccctcccactgcacctcatgttgcttatatgcagccaaaagcaaatgcacct
tccttcttcatgacagatgaactcagacaggagctgatcaaccgacatttaataacaatg
gctcaaattgatcaagcagatatccctgcagtccctacagaagttgacagctaccacagc
cttttccctttagaaccactgccaccacccaatcggatacagaaaacaagcaactttggg
tacattacatcatgctacaaagctgtaaatagcaaagatgatctgccatattgccttcgg
aggatacatggtttccgtcttgttaacacaaagtgcatggtattggttgacatgtggaaa
aaaattcaacactcgaatattgtaactctgcgtgaagtgtttaccactaaagcatttgga
gaacattctcttgtgtttgcatacgattttcatgctggaggagagacgatgatgagcaga
cactttaatgaccctagtgctgatgcctatttcactaaaaggaaatggggtcagcatgat
ggtcctctgccccggcagcatgctgggttactaccagagtctcttatttgggcatatatt
gtgcagctcagctctgcattgaggaccattcatacagcaggattagcatgtcgagttatg
gatccaacaaagattttagtaacgggcaaaacaaggttacgagtgaattgtgttggagtc
tttgatgttttaacatttgataacagtcagaataatccactggcactaatggctcagttt
cagcaagcagatctgatctcactaggaaaagttgtgttggcgttggcttgcaattctttg
tcaggaattcagagagaaaatttgcagaaagctatggaactggtgacaatcaactattcc
tctgatctgaagaatctgattttgtatttgctgactgaccaaaataggcttcgcagtgta
aatgatatcatgcctatgattggtgcacgattctatactcaactggatgctgctcaaatg
agaaatgatgttatagaggaagaccttgcaaaggaggtgcagaatggaaggttgtttagg
cttctagcaaaattgggaacaatcaatgagagaccagaatttcagaaagacccaacttgg
tcagaaactggagaccgatatctactgaagctctttcgggatcatcttttccatcaggtg
acagaagcaggcactccttggattgacctcagtcacattatctcatgtcttaacaagtta
gatgctggtgtgccagaaaaaataagcctcatttccagagacgagaagagtgtacttgtg
gtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactaattgcagcc
gcaaatggtcagttgtag
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