Mauremys reevesii (Reeves's turtle): 120403282
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Entry
120403282 CDS
T07797
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120403282 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120403282 (CSTF3)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120403282 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
120403282
NCBI-ProteinID:
XP_039390126
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Position
LG4:complement(92523591..92603873)
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AA seq
718 aa
AA seq
DB search
MSAEGAAGDQAPEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKMPETVDEAVRII
TGGLPELTVEGNGPVENNTMFNKAVKRPNEDSDDEEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagagggagccgctggcgaccaggctcctgaatatgttccagaaaaagtgaag
aaggctgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattacgacaaagtagaaaagttgtttcagagatgccttatgaaagtgctacacatcgat
ttatggaagtgttacctttcatatgtacgtgaaaccaagggaaagctacccagttacaaa
gaaaaaatggctcaggcatatgacttcgctctggataaaatcggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaggcagttggatcttat
gcagaaaaccagaggataacagctgttcgtagggtttaccagcgaggttgcgtgaaccca
atgatcaacattgaacaactctggagagattataacaaatatgaagagggaatcaatatt
cacttagctaaaaaaatgattgaagatcggagtagagattatatgaatgctagacgtgtg
gccaaggaatatgagactgtaatgaaaggtctggatcgcaatgctccctccgtcccccca
cagaatactccccaagaggctcagcaggtcgacatgtggaagaaatatatccagtgggaa
aaaagtaatccactgcgcacagaagaccaaactctcataacaaaaagagttatgtttgct
tatgagcagtgcctgttggtcctcgggcatcatccagatatctggtacgaggctgcacag
tatcttgagcaatccagtaagctgctagctgagaaaggggacatgaacaatgctaaactg
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttactaaagaagaac
atgcttctgtactttgcatatgcagactatgaagagagtcgaatgaagtatgagaaggtg
cacagcatatataaccggctcttggctattgaagatattgatcccacattggtatatata
caatatatgaaatttgcaaggcgggcagaaggcatcaaatctggaagaatgatatttaag
aaagcgagagaggatgcccggacccgccatcatgtctatgttacggcagctttgatggag
tattactgtagtaaggacaagtcagtagccttcaagatttttgagttggggctgaagaaa
tatggagacattccagaatatgtactggcatacattgactatctgtctcaccttaatgag
gacaataatacaagagttttgtttgaacgtgttttaacctcaggaagcctcccaccagag
aaatctggagaaatctgggcccgatttttagcttttgaaagtaacattggtgatctagct
agtatacttaaagtggaaaaacggaggtttacagccttcaaagaagaatacgagggtaaa
gagacagctctgctggtagataggtacaagttcatggatttgtacccttgctctgcaagt
gaacttaaagctcttggttacaaggatgtctcacgtgccaagttagcagccattattcca
gaccctgtggtggctccttctatagtgcctgttctaaaagatgaagtggacagaaaacct
gaatacccgaaaccagacacccagcagatgattccatttcagccaagacatttagcacct
ccaggtttgcatcctgtgccaggcggtgtatttccagtcccaccagcggctgtagtttta
atgaagctcctcccacctcctgtgtgttttcagggcccttttgtgcaagtggatgaactc
atggagatttttcgaagatgcaaaatgccagaaactgttgatgaagctgtaagaataatt
accggaggcctgcctgaattaactgtggaaggcaatggacctgtggaaaataatactatg
ttcaataaagctgtcaagagaccaaatgaagattctgatgatgaagaggagaagggatca
gtggttcctcctgtacatgacatatacagagcacgacagcaaaagagaatccgatga
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